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Change source activate hint to Conda activate #471

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brechtmann opened this issue Jan 30, 2020 · 1 comment
Open

Change source activate hint to Conda activate #471

brechtmann opened this issue Jan 30, 2020 · 1 comment
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@brechtmann
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brechtmann commented Jan 30, 2020

When creating a Kipoi env it recommends to activate it using source activate (last line)
change that and also in the documentation
to
conda activate

$ kipoi env create BPNet-OSKN
INFO [kipoi.cli.env] Writing environment file: /tmp/kipoi/envfiles/e01763d9
INFO [kipoi.cli.env] Loading model: BPNet-OSKN description
INFO [kipoi.sources] Update /data/nasif12/home_if12/brechtma/.kipoi/models/
Already up-to-date.
INFO [kipoi.cli.env] kipoiseq not installed. Using default kipoiseq dependencies for the dataloader: kipoiseq.dataloaders.SeqIntervalDl
INFO [kipoi.cli.env] Environment name: kipoi-BPNet-OSKN
INFO [kipoi.cli.env] Output env file: /tmp/kipoi/envfiles/e01763d9/kipoi-BPNet-OSKN.yaml
INFO [kipoi.cli.env] Done writing the environment file!
INFO [kipoi.cli.env] Creating conda env from file: /tmp/kipoi/envfiles/e01763d9/kipoi-BPNet-OSKN.yaml
INFO [kipoi.cli.env] Done!

Activate the environment via:
source activate kipoi-BPNet-OSKN
@Hoeze
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Hoeze commented Jan 30, 2020

@zahoorz Could you please fix that?

@Hoeze Hoeze added the docs label Feb 6, 2020
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