.cherry-pick

git remote add jmcarcell https://github.com/jmcarcell/spack || true
git fetch jmcarcell -q

# Hardcode CMAKE_INSTALL_LIBDIR to lib. This is needed for AlmaLinux 9 where
# CMAKE_INSTALL_LIBDIR gets chosen as lib64 and this causes problems in some
# packages that expect lib. Since spack installs each package to its own prefix
# we don't need to worry about multilib environments
git cherry-pick 42c070632bcb0f8333bc029e17a53646d9589d7e -X theirs --no-commit

# Because the patch above and py-onnx being a python package, it will try to find
# protobuf in CMAKE_INSTALL_LIBDIR which is lib64 so a symlink is created here
git cherry-pick 3ec184fad8582cc501f55e0ea0b0f6b3fb9b70bf -X theirs --no-commit

# add a recent version of madgraph, remove!
curl -s https://patch-diff.githubusercontent.com/raw/spack/spack/pull/41128.diff | patch -p1

# add vdt for CPATH, needed for podio+rntuple
git cherry-pick f97fabc3ff12527e5220ea6917719a73f8bd4315 -X theirs --no-commit

# podio: add rpath, remove when https://github.com/spack/spack/pull/42844 is merged
curl -s https://patch-diff.githubusercontent.com/raw/spack/spack/pull/42844.diff | patch -p1

# geant4 twisted tubes: remove when https://github.com/spack/spack/pull/45368 is merged or after 11.2.2
# curl -s https://patch-diff.githubusercontent.com/raw/spack/spack/pull/45368.diff | patch -p1

# geant4 gen trap fix, remove after 11.2.2
# git cherry-pick 8daeaeac29e817f85d86fcfa85b3293a7465b280 -X theirs --no-commit

# Both geant4 changes in a single commit
git cherry-pick c8191268c3ea4aca6e870ad40d695e92f94d0e47 -X theirs --no-commit

# zziplib: add 0.13.78, remove!
git cherry-pick db5538f5f12de8d1599ef4339e2dd1756d1230ad -X theirs --no-commit

# pybind11: fix pkgconfig, remove!
curl -s https://patch-diff.githubusercontent.com/raw/spack/spack/pull/46298.diff | patch -p1

# gaudi: add patches, remove!
curl -s https://patch-diff.githubusercontent.com/raw/spack/spack/pull/46365.diff | patch -p1

# py-awkward and py-awkward-cpp: fixes, remove!
curl -s https://patch-diff.githubusercontent.com/raw/spack/spack/pull/46372.diff | patch -p1

# py-onnx: add fixes for GCC 14, remove!
# curl -s https://patch-diff.githubusercontent.com/raw/spack/spack/pull/46390.diff | patch -p1
git cherry-pick 096ab11961995ac8d69f7b177cbcadf618d3068e -X theirs --no-commit

# texlive: add new versions, remove!
git cherry-pick 5398b1be15245e1be480c5aa4706f57795208505 -X theirs --no-commit

# texlive: fix mtxrun, remove!
curl -s https://patch-diff.githubusercontent.com/raw/spack/spack/pull/46465.diff | patch -p1

# py-onnx: add a patch for the standard, remove after 1.15.0
git add .
git cherry-pick 248a7c0f4894222bfcd0bb76b13a984c92d4c938 -X theirs --no-commit

# py-cython: add version 3.0.11, remove when https://github.com/spack/spack/pull/46772 is merged
git cherry-pick 072d308c0b4b53c0d0528ee3a7e59de110133968 -X theirs --no-commit
# py-lxml: add version 5.3.0, remove when https://github.com/spack/spack/pull/46771 is merged
git cherry-pick 94ef87d013b3ea9627c1aa850b8929dbe217bf20 -X theirs --no-commit

# madgraph5amc: add v3.5.6, remove!
git cherry-pick 5777576e37ee28d674e2520d3f10b3f651a7680e -X theirs --no-commit

# py-gevent: add a patch for cython 3.0.10 and 3.0.11, remove!
git cherry-pick 06f21ae4e2499bccaa6c52359bafbb93c161944b -X theirs --no-commit

# py-hepmc3: Extend python when the python bindings are enabled
git cherry-pick 04b8b88bd6485d4cf01373ec9ccf18a49f30b34d -X theirs --no-commit

# Versions for the release, in order DD4hep and podio&edm4hep and LCIO
git cherry-pick 43d1cdb0bd4780bff369dafa681a8a7939313784 -X theirs --no-commit
git cherry-pick 5d9c534018593fdef5db1028c60026d26bf4d65b -X theirs --no-commit
git cherry-pick be8112e1ff9dea12296bfafb341cc5953e72c415 -X theirs --no-commit
git cherry-pick 1c6b6d0a0819409b75d7a59a90c3daf24fe80fee -X theirs --no-commit
# delphes: Add version 3.5.1pre11
git cherry-pick 1aa5c7450c5947abae090c7a89b64b1236e1a153 -X theirs --no-commit