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DESCRIPTION
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DESCRIPTION
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Package: anndataR
Title: AnnData interoperability in R
Version: 0.99.0
Authors@R: c(
person(
"Robrecht", "Cannoodt",
email = "[email protected]",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-3641-729X", github = "rcannood")
),
person(
"Luke", "Zappia",
email = "[email protected]",
role = "aut",
comment = c(ORCID = "0000-0001-7744-8565", github = "lazappi")
),
person(
"Martin", "Morgan",
email = "[email protected]",
role = "aut",
comment = c(ORCID = "0000-0002-5874-8148", github = "mtmorgan")
),
person(
"Louise", "Deconinck",
email = "[email protected]",
role = "aut",
comment = c(ORCID = "0000-0001-8100-6823", github = "LouiseDck")
),
person(
"Danila", "Bredikhin",
email = "[email protected]",
role = "ctb",
comment = c(ORCID = "0000-0001-8089-6983", github = "gtca")
),
person(
"Isaac", "Virshup",
role = "ctb",
comment = c(ORCID = "0000-0002-1710-8945", github = "ivirshup")
),
person(
"Brian", "Schilder",
role = "aut",
email = "[email protected]",
comment = c(ORCID = "0000-0001-5949-2191", github = "bschilder")
),
person(
"Chananchida", "Sang-aram",
role = "ctb",
comment = c(ORCID = "0000-0002-0922-0822", github = "csangara")
)
)
Description: Bring the power and flexibility of AnnData to the R
ecosystem, allowing you to effortlessly manipulate and analyze your
single-cell data. This package lets you work with backed h5ad and zarr
files, directly access various slots (e.g. X, obs, var), or convert
the data into SingleCellExperiment and Seurat objects.
License: MIT + file LICENSE
URL: https://scverse.org/anndataR, https://github.com/scverse/anndataR
BugReports: https://github.com/scverse/anndataR/issues
Depends:
R (>= 4.0.0)
Imports:
Matrix,
methods,
R6
Suggests:
anndata,
BiocStyle,
knitr,
reticulate,
rhdf5,
rmarkdown,
S4Vectors,
SeuratObject,
SingleCellExperiment,
SummarizedExperiment,
testthat (>= 3.0.0),
withr
VignetteBuilder:
knitr
Config/Needs/website: pkgdown, tibble, knitr, rprojroot, stringr, readr,
purrr, dplyr, tidyr
Config/testthat/edition: 3
Encoding: UTF-8
Roxygen: list(markdown = TRUE, r6 = TRUE)
RoxygenNote: 7.2.3
biocViews: SingleCell, DataImport, DataRepresentation