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Featurizer failed error #31

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abhinavgupta0110 opened this issue Nov 20, 2024 · 2 comments
Open

Featurizer failed error #31

abhinavgupta0110 opened this issue Nov 20, 2024 · 2 comments

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@abhinavgupta0110
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abhinavgupta0110 commented Nov 20, 2024

I am getting the following error when trying to predict protein complexes. It only happens sometimes, especially when trying to sample a lot.

Featurizer failed on {file_name} with error index 454656 is out of bounds for axis 0 with size 454656. Skipping.

CUDA device: 'NVIDIA H100 80GB HBM3'

It would be great if someone could tell the specific reason behind this error (unless it is purely a OOM problem).

Thanks,
Abhinav

@jwohlwend
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jwohlwend commented Nov 21, 2024

Duplicate of #4 . We're actively looking into this, it's been hard for us to replicate the issue on our end.

@shataisheng
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I encountered the same issue when I ran it on the CPU platform, but after increasing the RAM size of the computer, the error disappeared.
My FASTA file contains three proteins, and each of them contains 120 amino acids (aa). The program requires at least 25GB of RAM, even though the size of the trained model is only 6.5GB.

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