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dev.py
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dev.py
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#! /usr/bin/env python3
'''
Developer CLI: building (meson), tests, benchmark, etc.
This file contains tasks definitions for doit (https://pydoit.org).
And also a CLI interface using click (https://click.palletsprojects.com).
The CLI is ideal for project contributors while,
doit interface is better suited for authoring the development tasks.
REQUIREMENTS:
--------------
- see environment.yml: doit, pydevtool, click, rich-click
# USAGE:
## 1 - click API
Commands can added using default Click API. i.e.
```
@cli.command()
@click.argument('extra_argv', nargs=-1)
@click.pass_obj
def python(ctx_obj, extra_argv):
"""Start a Python shell with PYTHONPATH set"""
```
## 2 - class based Click command definition
`CliGroup` provides an alternative class based API to create Click commands.
Just use the `cls_cmd` decorator. And define a `run()` method
```
@cli.cls_cmd('test')
class Test():
"""Run tests"""
@classmethod
def run(cls):
print('Running tests...')
```
- Command may make use a Click.Group context defining a `ctx` class attribute
- Command options are also define as class attributes
```
@cli.cls_cmd('test')
class Test():
"""Run tests"""
ctx = CONTEXT
verbose = Option(
['--verbose', '-v'], default=False, is_flag=True, help="verbosity")
@classmethod
def run(cls, **kwargs): # kwargs contains options from class and CONTEXT
print('Running tests...')
```
## 3 - class based interface can be run as a doit task by subclassing from Task
- Extra doit task metadata can be defined as class attribute TASK_META.
- `run()` method will be used as python-action by task
```
@cli.cls_cmd('test')
class Test(Task): # Task base class, doit will create a task
"""Run tests"""
ctx = CONTEXT
TASK_META = {
'task_dep': ['build'],
}
@classmethod
def run(cls, **kwargs):
pass
```
## 4 - doit tasks with cmd-action "shell" or dynamic metadata
Define method `task_meta()` instead of `run()`:
```
@cli.cls_cmd('refguide-check')
class RefguideCheck(Task):
@classmethod
def task_meta(cls, **kwargs):
return {
```
'''
import os
import subprocess
import sys
import warnings
import shutil
import json
import datetime
import time
import importlib
import importlib.util
import errno
import contextlib
import sysconfig
import math
import traceback
from concurrent.futures.process import _MAX_WINDOWS_WORKERS
from pathlib import Path
from collections import namedtuple
from types import ModuleType as new_module
from dataclasses import dataclass
import click
from click import Option, Argument
from doit.cmd_base import ModuleTaskLoader
from doit.reporter import ZeroReporter
from doit.exceptions import TaskError
from doit.api import run_tasks
from doit import task_params
from pydevtool.cli import UnifiedContext, CliGroup, Task
from rich.console import Console
from rich.panel import Panel
from rich.theme import Theme
from rich_click import rich_click
DOIT_CONFIG = {
'verbosity': 2,
'minversion': '0.36.0',
}
console_theme = Theme({
"cmd": "italic gray50",
})
if sys.platform == 'win32':
class EMOJI:
cmd = ">"
else:
class EMOJI:
cmd = ":computer:"
rich_click.STYLE_ERRORS_SUGGESTION = "yellow italic"
rich_click.SHOW_ARGUMENTS = True
rich_click.GROUP_ARGUMENTS_OPTIONS = False
rich_click.SHOW_METAVARS_COLUMN = True
rich_click.USE_MARKDOWN = True
rich_click.OPTION_GROUPS = {
"dev.py": [
{
"name": "Options",
"options": [
"--help", "--build-dir", "--no-build", "--install-prefix"],
},
],
"dev.py test": [
{
"name": "Options",
"options": ["--help", "--verbose", "--parallel", "--coverage",
"--durations"],
},
{
"name": "Options: test selection",
"options": ["--submodule", "--tests", "--mode"],
},
],
}
rich_click.COMMAND_GROUPS = {
"dev.py": [
{
"name": "build & testing",
"commands": ["build", "test"],
},
{
"name": "static checkers",
"commands": ["lint", "mypy"],
},
{
"name": "environments",
"commands": ["shell", "python", "ipython", "show_PYTHONPATH"],
},
{
"name": "documentation",
"commands": ["doc", "refguide-check", "smoke-docs", "smoke-tutorial"],
},
{
"name": "release",
"commands": ["notes", "authors"],
},
{
"name": "benchmarking",
"commands": ["bench"],
},
]
}
class ErrorOnlyReporter(ZeroReporter):
desc = """Report errors only"""
def runtime_error(self, msg):
console = Console()
console.print("[red bold] msg")
def add_failure(self, task, fail_info):
console = Console()
if isinstance(fail_info, TaskError):
console.print(f'[red]Task Error - {task.name}'
f' => {fail_info.message}')
if fail_info.traceback:
console.print(Panel(
"".join(fail_info.traceback),
title=f"{task.name}",
subtitle=fail_info.message,
border_style="red",
))
CONTEXT = UnifiedContext({
'build_dir': Option(
['--build-dir'], metavar='BUILD_DIR',
default='build', show_default=True,
help=':wrench: Relative path to the build directory.'),
'no_build': Option(
["--no-build", "-n"], default=False, is_flag=True,
help=(":wrench: Do not build the project"
" (note event python only modification require build).")),
'install_prefix': Option(
['--install-prefix'], default=None, metavar='INSTALL_DIR',
help=(":wrench: Relative path to the install directory."
" Default is <build-dir>-install.")),
})
def run_doit_task(tasks):
"""
:param tasks: (dict) task_name -> {options}
"""
loader = ModuleTaskLoader(globals())
doit_config = {
'verbosity': 2,
'reporter': ErrorOnlyReporter,
}
return run_tasks(loader, tasks, extra_config={'GLOBAL': doit_config})
class CLI(CliGroup):
context = CONTEXT
run_doit_task = run_doit_task
@click.group(cls=CLI)
@click.pass_context
def cli(ctx, **kwargs):
"""Developer Tool for SciPy
\bCommands that require a built/installed instance are marked with :wrench:.
\b**python dev.py --build-dir my-build test -s stats**
"""
CLI.update_context(ctx, kwargs)
PROJECT_MODULE = "scipy"
PROJECT_ROOT_FILES = ['scipy', 'LICENSE.txt', 'meson.build']
@dataclass
class Dirs:
"""
root:
Directory where scr, build config and tools are located
(and this file)
build:
Directory where build output files (i.e. *.o) are saved
install:
Directory where .so from build and .py from src are put together.
site:
Directory where the built SciPy version was installed.
This is a custom prefix, followed by a relative path matching
the one the system would use for the site-packages of the active
Python interpreter.
"""
# all paths are absolute
root: Path
build: Path
installed: Path
site: Path # <install>/lib/python<version>/site-packages
def __init__(self, args=None):
""":params args: object like Context(build_dir, install_prefix)"""
self.root = Path(__file__).parent.absolute()
if not args:
return
self.build = Path(args.build_dir).resolve()
if args.install_prefix:
self.installed = Path(args.install_prefix).resolve()
else:
self.installed = self.build.parent / (self.build.stem + "-install")
# relative path for site-package with py version
# i.e. 'lib/python3.10/site-packages'
self.site = self.get_site_packages()
def add_sys_path(self):
"""Add site dir to sys.path / PYTHONPATH"""
site_dir = str(self.site)
sys.path.insert(0, site_dir)
os.environ['PYTHONPATH'] = \
os.pathsep.join((site_dir, os.environ.get('PYTHONPATH', '')))
def get_site_packages(self):
"""
Depending on whether we have debian python or not,
return dist_packages path or site_packages path.
"""
if sys.version_info >= (3, 12):
plat_path = Path(sysconfig.get_path('platlib'))
else:
# infer meson install path for python < 3.12 in
# debian patched python
if 'deb_system' in sysconfig.get_scheme_names():
plat_path = Path(sysconfig.get_path('platlib', 'deb_system'))
else:
plat_path = Path(sysconfig.get_path('platlib'))
return self.installed / plat_path.relative_to(sys.exec_prefix)
@contextlib.contextmanager
def working_dir(new_dir):
current_dir = os.getcwd()
try:
os.chdir(new_dir)
yield
finally:
os.chdir(current_dir)
def import_module_from_path(mod_name, mod_path):
"""Import module with name `mod_name` from file path `mod_path`"""
spec = importlib.util.spec_from_file_location(mod_name, mod_path)
mod = importlib.util.module_from_spec(spec)
spec.loader.exec_module(mod)
return mod
def get_test_runner(project_module):
"""
get Test Runner from locally installed/built project
"""
__import__(project_module)
# scipy._lib._testutils:PytestTester
test = sys.modules[project_module].test
version = sys.modules[project_module].__version__
mod_path = sys.modules[project_module].__file__
mod_path = os.path.abspath(os.path.join(os.path.dirname(mod_path)))
return test, version, mod_path
############
@cli.cls_cmd('build')
class Build(Task):
""":wrench: Build & install package on path.
\b
```shell-session
Examples:
$ python dev.py build --asan ;
ASAN_OPTIONS=detect_leaks=0:symbolize=1:strict_init_order=true
LD_PRELOAD=$(gcc --print-file-name=libasan.so)
python dev.py test -v -t
./scipy/ndimage/tests/test_morphology.py -- -s
```
"""
ctx = CONTEXT
werror = Option(
['--werror'], default=False, is_flag=True,
help="Treat warnings as errors")
gcov = Option(
['--gcov'], default=False, is_flag=True,
help="enable C code coverage via gcov (requires GCC)."
"gcov output goes to build/**/*.gc*")
asan = Option(
['--asan'], default=False, is_flag=True,
help=("Build and run with AddressSanitizer support. "
"Note: the build system doesn't check whether "
"the project is already compiled with ASan. "
"If not, you need to do a clean build (delete "
"build and build-install directories)."))
debug = Option(
['--debug', '-d'], default=False, is_flag=True, help="Debug build")
release = Option(
['--release', '-r'], default=False, is_flag=True, help="Release build")
parallel = Option(
['--parallel', '-j'], default=None, metavar='N_JOBS',
help=("Number of parallel jobs for building. "
"This defaults to the number of available physical CPU cores"))
setup_args = Option(
['--setup-args', '-C'], default=[], multiple=True,
help=("Pass along one or more arguments to `meson setup` "
"Repeat the `-C` in case of multiple arguments."))
show_build_log = Option(
['--show-build-log'], default=False, is_flag=True,
help="Show build output rather than using a log file")
with_scipy_openblas = Option(
['--with-scipy-openblas'], default=False, is_flag=True,
help=("If set, use the `scipy-openblas32` wheel installed into the "
"current environment as the BLAS/LAPACK to build against."))
with_accelerate = Option(
['--with-accelerate'], default=False, is_flag=True,
help=("If set, use `Accelerate` as the BLAS/LAPACK to build against."
" Takes precedence over -with-scipy-openblas (macOS only)")
)
tags = Option(
['--tags'], default="runtime,python-runtime,tests,devel",
show_default=True, help="Install tags to be used by meson."
)
@classmethod
def setup_build(cls, dirs, args):
"""
Setting up meson-build
"""
for fn in PROJECT_ROOT_FILES:
if not (dirs.root / fn).exists():
print("To build the project, run dev.py in "
"git checkout or unpacked source")
sys.exit(1)
env = dict(os.environ)
cmd = ["meson", "setup", dirs.build, "--prefix", dirs.installed]
build_dir = dirs.build
run_dir = Path()
if build_dir.exists() and not (build_dir / 'meson-info').exists():
if list(build_dir.iterdir()):
raise RuntimeError("Can't build into non-empty directory "
f"'{build_dir.absolute()}'")
if sys.platform == "cygwin":
# Cygwin only has netlib lapack, but can link against
# OpenBLAS rather than netlib blas at runtime. There is
# no libopenblas-devel to enable linking against
# openblas-specific functions or OpenBLAS Lapack
cmd.extend(["-Dlapack=lapack", "-Dblas=blas"])
build_options_file = (
build_dir / "meson-info" / "intro-buildoptions.json")
if build_options_file.exists():
with open(build_options_file) as f:
build_options = json.load(f)
installdir = None
for option in build_options:
if option["name"] == "prefix":
installdir = option["value"]
break
if installdir != str(dirs.installed):
run_dir = build_dir
cmd = ["meson", "setup", "--reconfigure",
"--prefix", str(dirs.installed)]
else:
return
if args.werror:
cmd += ["--werror"]
if args.debug or args.release:
if args.debug and args.release:
raise ValueError("Set at most one of `--debug` and `--release`!")
if args.debug:
buildtype = 'debug'
cflags_unwanted = ('-O1', '-O2', '-O3')
elif args.release:
buildtype = 'release'
cflags_unwanted = ('-O0', '-O1', '-O2')
cmd += [f"-Dbuildtype={buildtype}"]
if 'CFLAGS' in os.environ.keys():
# Check that CFLAGS doesn't contain something that supercedes -O0
# for a plain debug build (conda envs tend to set -O2)
cflags = os.environ['CFLAGS'].split()
for flag in cflags_unwanted:
if flag in cflags:
raise ValueError(f"A {buildtype} build isn't possible, "
f"because CFLAGS contains `{flag}`."
"Please also check CXXFLAGS and FFLAGS.")
if args.gcov:
cmd += ['-Db_coverage=true']
if args.asan:
cmd += ['-Db_sanitize=address,undefined']
if args.setup_args:
cmd += [str(arg) for arg in args.setup_args]
if args.with_accelerate:
# on a mac you probably want to use accelerate over scipy_openblas
cmd += ["-Dblas=accelerate"]
elif args.with_scipy_openblas:
cls.configure_scipy_openblas()
env['PKG_CONFIG_PATH'] = os.pathsep.join([
os.getcwd(),
env.get('PKG_CONFIG_PATH', '')
])
# Setting up meson build
cmd_str = ' '.join([str(p) for p in cmd])
cls.console.print(f"{EMOJI.cmd} [cmd] {cmd_str}")
ret = subprocess.call(cmd, env=env, cwd=run_dir)
if ret == 0:
print("Meson build setup OK")
else:
print("Meson build setup failed!")
sys.exit(1)
return env
@classmethod
def build_project(cls, dirs, args, env):
"""
Build a dev version of the project.
"""
cmd = ["ninja", "-C", str(dirs.build)]
if args.parallel is None:
# Use number of physical cores rather than ninja's default of 2N+2,
# to avoid out of memory issues (see gh-17941 and gh-18443)
n_cores = cpu_count(only_physical_cores=True)
cmd += [f"-j{n_cores}"]
else:
cmd += ["-j", str(args.parallel)]
# Building with ninja-backend
cmd_str = ' '.join([str(p) for p in cmd])
cls.console.print(f"{EMOJI.cmd} [cmd] {cmd_str}")
ret = subprocess.call(cmd, env=env, cwd=dirs.root)
if ret == 0:
print("Build OK")
else:
print("Build failed!")
sys.exit(1)
@classmethod
def install_project(cls, dirs, args):
"""
Installs the project after building.
"""
if dirs.installed.exists():
non_empty = len(os.listdir(dirs.installed))
if non_empty and not dirs.site.exists():
raise RuntimeError("Can't install in non-empty directory: "
f"'{dirs.installed}'")
cmd = ["meson", "install", "-C", args.build_dir,
"--only-changed", "--tags", args.tags]
log_filename = dirs.root / 'meson-install.log'
start_time = datetime.datetime.now()
cmd_str = ' '.join([str(p) for p in cmd])
cls.console.print(f"{EMOJI.cmd} [cmd] {cmd_str}")
if args.show_build_log:
ret = subprocess.call(cmd, cwd=dirs.root)
else:
print("Installing, see meson-install.log...")
with open(log_filename, 'w') as log:
p = subprocess.Popen(cmd, stdout=log, stderr=log,
cwd=dirs.root)
try:
# Wait for it to finish, and print something to indicate the
# process is alive, but only if the log file has grown (to
# allow continuous integration environments kill a hanging
# process accurately if it produces no output)
last_blip = time.time()
last_log_size = os.stat(log_filename).st_size
while p.poll() is None:
time.sleep(0.5)
if time.time() - last_blip > 60:
log_size = os.stat(log_filename).st_size
if log_size > last_log_size:
elapsed = datetime.datetime.now() - start_time
print(f" ... installation in progress ({elapsed} "
"elapsed)")
last_blip = time.time()
last_log_size = log_size
ret = p.wait()
except: # noqa: E722
p.terminate()
raise
elapsed = datetime.datetime.now() - start_time
if ret != 0:
if not args.show_build_log:
with open(log_filename) as f:
print(f.read())
print(f"Installation failed! ({elapsed} elapsed)")
sys.exit(1)
# ignore everything in the install directory.
with open(dirs.installed / ".gitignore", "w") as f:
f.write("*")
if sys.platform == "cygwin":
rebase_cmd = ["/usr/bin/rebase", "--database", "--oblivious"]
rebase_cmd.extend(Path(dirs.installed).glob("**/*.dll"))
subprocess.check_call(rebase_cmd)
print("Installation OK")
return
@classmethod
def configure_scipy_openblas(self, blas_variant='32'):
"""Create scipy-openblas.pc and scipy/_distributor_init_local.py
Requires a pre-installed scipy-openblas32 wheel from PyPI.
"""
basedir = os.getcwd()
pkg_config_fname = os.path.join(basedir, "scipy-openblas.pc")
if os.path.exists(pkg_config_fname):
return None
module_name = f"scipy_openblas{blas_variant}"
try:
openblas = importlib.import_module(module_name)
except ModuleNotFoundError:
raise RuntimeError(f"Importing '{module_name}' failed. "
"Make sure it is installed and reachable "
"by the current Python executable. You can "
f"install it via 'pip install {module_name}'.")
local = os.path.join(basedir, "scipy", "_distributor_init_local.py")
with open(local, "w", encoding="utf8") as fid:
fid.write(f"import {module_name}\n")
with open(pkg_config_fname, "w", encoding="utf8") as fid:
fid.write(openblas.get_pkg_config())
@classmethod
def run(cls, add_path=False, **kwargs):
kwargs.update(cls.ctx.get(kwargs))
Args = namedtuple('Args', [k for k in kwargs.keys()])
args = Args(**kwargs)
cls.console = Console(theme=console_theme)
dirs = Dirs(args)
if args.no_build:
print("Skipping build")
else:
env = cls.setup_build(dirs, args)
cls.build_project(dirs, args, env)
cls.install_project(dirs, args)
# add site to sys.path
if add_path:
dirs.add_sys_path()
@cli.cls_cmd('test')
class Test(Task):
""":wrench: Run tests.
\b
```python
Examples:
$ python dev.py test -s {SAMPLE_SUBMODULE}
$ python dev.py test -t scipy.optimize.tests.test_minimize_constrained
$ python dev.py test -s cluster -m full --durations 20
$ python dev.py test -s stats -- --tb=line # `--` passes next args to pytest
$ python dev.py test -b numpy -b torch -s cluster
```
"""
ctx = CONTEXT
verbose = Option(
['--verbose', '-v'], default=False, is_flag=True,
help="more verbosity")
# removed doctests as currently not supported by _lib/_testutils.py
# doctests = Option(['--doctests'], default=False)
coverage = Option(
['--coverage', '-c'], default=False, is_flag=True,
help=("report coverage of project code. "
"HTML output goes under build/coverage"))
durations = Option(
['--durations', '-d'], default=None, metavar="NUM_TESTS",
help="Show timing for the given number of slowest tests"
)
submodule = Option(
['--submodule', '-s'], default=None, metavar='MODULE_NAME',
help="Submodule whose tests to run (cluster, constants, ...)")
tests = Option(
['--tests', '-t'], default=None, multiple=True, metavar='TESTS',
help='Specify tests to run')
mode = Option(
['--mode', '-m'], default='fast', metavar='MODE', show_default=True,
help=("'fast', 'full', or something that could be passed to "
"`pytest -m` as a marker expression"))
parallel = Option(
['--parallel', '-j'], default=1, metavar='N_JOBS',
help="Number of parallel jobs for testing"
)
array_api_backend = Option(
['--array-api-backend', '-b'], default=None, metavar='ARRAY_BACKEND',
multiple=True,
help=(
"Array API backend "
"('all', 'numpy', 'torch', 'cupy', 'array_api_strict', 'jax.numpy')."
)
)
# Argument can't have `help=`; used to consume all of `-- arg1 arg2 arg3`
pytest_args = Argument(
['pytest_args'], nargs=-1, metavar='PYTEST-ARGS', required=False
)
TASK_META = {
'task_dep': ['build'],
}
@staticmethod
def run_lcov(dirs):
print("Capturing lcov info...")
LCOV_OUTPUT_FILE = os.path.join(dirs.build, "lcov.info")
LCOV_OUTPUT_DIR = os.path.join(dirs.build, "lcov")
BUILD_DIR = str(dirs.build)
try:
os.unlink(LCOV_OUTPUT_FILE)
except OSError:
pass
try:
shutil.rmtree(LCOV_OUTPUT_DIR)
except OSError:
pass
lcov_cmd = [
"lcov", "--capture",
"--directory", BUILD_DIR,
"--output-file", LCOV_OUTPUT_FILE,
"--no-external"]
lcov_cmd_str = " ".join(lcov_cmd)
emit_cmdstr(" ".join(lcov_cmd))
try:
subprocess.call(lcov_cmd)
except OSError as err:
if err.errno == errno.ENOENT:
print(f"Error when running '{lcov_cmd_str}': {err}\n"
"You need to install LCOV (https://lcov.readthedocs.io/en/latest/) "
"to capture test coverage of C/C++/Fortran code in SciPy.")
return False
raise
print("Generating lcov HTML output...")
genhtml_cmd = [
"genhtml", "-q", LCOV_OUTPUT_FILE,
"--output-directory", LCOV_OUTPUT_DIR,
"--legend", "--highlight"]
emit_cmdstr(genhtml_cmd)
ret = subprocess.call(genhtml_cmd)
if ret != 0:
print("genhtml failed!")
else:
print("HTML output generated under build/lcov/")
return ret == 0
@classmethod
def scipy_tests(cls, args, pytest_args):
dirs = Dirs(args)
dirs.add_sys_path()
print(f"SciPy from development installed path at: {dirs.site}")
# FIXME: support pos-args with doit
extra_argv = list(pytest_args[:]) if pytest_args else []
if extra_argv and extra_argv[0] == '--':
extra_argv = extra_argv[1:]
if args.coverage:
dst_dir = dirs.root / args.build_dir / 'coverage'
fn = dst_dir / 'coverage_html.js'
if dst_dir.is_dir() and fn.is_file():
shutil.rmtree(dst_dir)
extra_argv += ['--cov-report=html:' + str(dst_dir)]
shutil.copyfile(dirs.root / '.coveragerc',
dirs.site / '.coveragerc')
if args.durations:
extra_argv += ['--durations', args.durations]
# convert options to test selection
if args.submodule:
tests = [PROJECT_MODULE + "." + args.submodule]
elif args.tests:
tests = args.tests
else:
tests = None
if len(args.array_api_backend) != 0:
os.environ['SCIPY_ARRAY_API'] = json.dumps(list(args.array_api_backend))
runner, version, mod_path = get_test_runner(PROJECT_MODULE)
# FIXME: changing CWD is not a good practice
with working_dir(dirs.site):
print(f"Running tests for {PROJECT_MODULE} version:{version}, "
f"installed at:{mod_path}")
# runner verbosity - convert bool to int
verbose = int(args.verbose) + 1
was_built_with_gcov_flag = len(list(dirs.build.rglob("*.gcno"))) > 0
if was_built_with_gcov_flag:
config = importlib.import_module("scipy.__config__").show(mode='dicts')
compilers_config = config['Compilers']
cpp = compilers_config['c++']['name']
c = compilers_config['c']['name']
fortran = compilers_config['fortran']['name']
if not (c == 'gcc' and cpp == 'gcc' and fortran == 'gcc'):
print("SciPy was built with --gcov flag which requires "
"LCOV while running tests.\nFurther, LCOV usage "
"requires GCC for C, C++ and Fortran codes in SciPy.\n"
"Compilers used currently are:\n"
f" C: {c}\n C++: {cpp}\n Fortran: {fortran}\n"
"Therefore, exiting without running tests.")
exit(1) # Exit because tests will give missing symbol error
result = runner( # scipy._lib._testutils:PytestTester
args.mode,
verbose=verbose,
extra_argv=extra_argv,
doctests=False,
coverage=args.coverage,
tests=tests,
parallel=args.parallel)
if args.coverage and was_built_with_gcov_flag:
if not result:
print("Tests should succeed to generate "
"coverage reports using LCOV")
else:
return cls.run_lcov(dirs)
return result
@classmethod
def run(cls, pytest_args, **kwargs):
"""run unit-tests"""
kwargs.update(cls.ctx.get())
Args = namedtuple('Args', [k for k in kwargs.keys()])
args = Args(**kwargs)
return cls.scipy_tests(args, pytest_args)
@cli.cls_cmd('smoke-docs')
class SmokeDocs(Task):
# XXX This essntially is a copy-paste of the Task class. Consider de-duplicating.
ctx = CONTEXT
verbose = Option(
['--verbose', '-v'], default=False, is_flag=True,
help="more verbosity")
durations = Option(
['--durations', '-d'], default=None, metavar="NUM_TESTS",
help="Show timing for the given number of slowest tests"
)
submodule = Option(
['--submodule', '-s'], default=None, metavar='MODULE_NAME',
help="Submodule whose tests to run (cluster, constants, ...)")
tests = Option(
['--tests', '-t'], default=None, multiple=True, metavar='TESTS',
help='Specify tests to run')
parallel = Option(
['--parallel', '-j'], default=1, metavar='N_JOBS',
help="Number of parallel jobs for testing"
)
# Argument can't have `help=`; used to consume all of `-- arg1 arg2 arg3`
pytest_args = Argument(
['pytest_args'], nargs=-1, metavar='PYTEST-ARGS', required=False
)
TASK_META = {
'task_dep': ['build'],
}
@classmethod
def scipy_tests(cls, args, pytest_args):
dirs = Dirs(args)
dirs.add_sys_path()
print(f"SciPy from development installed path at: {dirs.site}")
# prevent obscure error later; cf https://github.com/numpy/numpy/pull/26691/
if not importlib.util.find_spec("scipy_doctest"):
raise ModuleNotFoundError("Please install scipy-doctest")
# FIXME: support pos-args with doit
extra_argv = list(pytest_args[:]) if pytest_args else []
if extra_argv and extra_argv[0] == '--':
extra_argv = extra_argv[1:]
if args.durations:
extra_argv += ['--durations', args.durations]
# convert options to test selection
if args.submodule:
tests = [PROJECT_MODULE + "." + args.submodule]
elif args.tests:
tests = args.tests
else:
tests = None
# Request doctesting; use strategy=api unless -t path/to/specific/file
# also switch off assertion rewriting: not useful for doctests
extra_argv += ["--doctest-modules", "--assert=plain"]
if not args.tests:
extra_argv += ['--doctest-collect=api']
runner, version, mod_path = get_test_runner(PROJECT_MODULE)
# FIXME: changing CWD is not a good practice
with working_dir(dirs.site):
print(f"Running tests for {PROJECT_MODULE} version:{version}, "
f"installed at:{mod_path}")
# runner verbosity - convert bool to int
verbose = int(args.verbose) + 1
result = runner( # scipy._lib._testutils:PytestTester
"fast",
verbose=verbose,
extra_argv=extra_argv,
doctests=True,
coverage=False,
tests=tests,
parallel=args.parallel)
return result
@classmethod
def run(cls, pytest_args, **kwargs):
"""run unit-tests"""
kwargs.update(cls.ctx.get())
Args = namedtuple('Args', [k for k in kwargs.keys()])
args = Args(**kwargs)
return cls.scipy_tests(args, pytest_args)
@cli.cls_cmd('smoke-tutorials')
class SmokeTutorials(Task):
""":wrench: Run smoke-tests on tutorial files."""
ctx = CONTEXT
tests = Option(
['--tests', '-t'], default=None, multiple=True, metavar='TESTS',
help='Specify *rst files to smoke test')
verbose = Option(
['--verbose', '-v'], default=False, is_flag=True, help="verbosity")
pytest_args = Argument(
['pytest_args'], nargs=-1, metavar='PYTEST-ARGS', required=False
)
@classmethod
def task_meta(cls, **kwargs):
kwargs.update(cls.ctx.get())
Args = namedtuple('Args', [k for k in kwargs.keys()])
args = Args(**kwargs)
dirs = Dirs(args)
cmd = ['pytest']
if args.tests:
cmd += list(args.tests)
else:
cmd += ['doc/source/tutorial', '--doctest-glob=*rst']
if args.verbose:
cmd += ['-v']
pytest_args = kwargs.pop('pytest_args', None)
extra_argv = list(pytest_args[:]) if pytest_args else []
if extra_argv and extra_argv[0] == '--':
extra_argv = extra_argv[1:]
cmd += extra_argv
cmd_str = ' '.join(cmd)
return {
'actions': [f'env PYTHONPATH={dirs.site} {cmd_str}'],
'task_dep': ['build'],
'io': {'capture': False},
}
@cli.cls_cmd('bench')
class Bench(Task):
""":wrench: Run benchmarks.
\b
```python
Examples:
$ python dev.py bench -t integrate.SolveBVP
$ python dev.py bench -t linalg.Norm
$ python dev.py bench --compare main
```
"""
ctx = CONTEXT