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KIR structural interpretation from raw reads

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kpi

KIR structural interpretation from raw reads

This code predicts the presence/absence of KIR genes and then uses that to predict pairs of structural (gene-content and order) haplotypes.

See the Docker image for directions on running. https://hub.docker.com/r/droeatnmdp/kpi/

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KIR structural interpretation from raw reads

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  • Groovy 80.4%
  • Nextflow 17.0%
  • Dockerfile 2.6%