.travis.yml

sudo:
  - false

language:
  - cpp

cache:
  directories:
    - linux_dependencies
    - osx_dependencies

jobs:
  include:

    - stage: "Compile and Test"
    # OS X Clang
      os: osx
      osx_image: xcode9.3
      env: C_COMPILER=clang CXX_COMPILER=clang++
      before_install:
        - brew install ninja

    # OS X GCC
    - os: osx
      osx_image: xcode9.3
      env: C_COMPILER=gcc CXX_COMPILER=g++
      before_install:
        - brew install ninja

    # Clang 4.0
    - os: linux
      compiler: clang
      env: C_COMPILER=clang-4.0 CXX_COMPILER=clang++-4.0
      addons:
        apt:
          sources:
            - boost-latest
            - ubuntu-toolchain-r-test
            - llvm-toolchain-trusty-4.0
          packages:
            - clang-4.0
            - libboost1.55-dev
            - libboost-filesystem1.55-dev
            - libboost-iostreams1.55-dev
            - libboost-program-options1.55-dev
            - libboost-regex1.55-dev
            - libboost-log1.55-dev
            - ninja-build

    # Clang 5.0
    - os: linux
      compiler: clang
      env: C_COMPILER=clang-5.0 CXX_COMPILER=clang++-5.0
      addons:
        apt:
          sources:
            - boost-latest
            - ubuntu-toolchain-r-test
            - llvm-toolchain-trusty-5.0
          packages:
            - clang-5.0
            - libboost1.55-dev
            - libboost-filesystem1.55-dev
            - libboost-iostreams1.55-dev
            - libboost-program-options1.55-dev
            - libboost-regex1.55-dev
            - libboost-log1.55-dev
            - ninja-build

    # GCC 4.8
    - os: linux
      compiler: gcc
      env: C_COMPILER=gcc-4.8 CXX_COMPILER=g++-4.8
      addons:
        apt:
          sources:
            - boost-latest
            - ubuntu-toolchain-r-test
          packages:
            - gcc-4.8
            - g++-4.8
            - libboost1.55-dev
            - libboost-filesystem1.55-dev
            - libboost-iostreams1.55-dev
            - libboost-program-options1.55-dev
            - libboost-regex1.55-dev
            - libboost-log1.55-dev
            - ninja-build

    # GCC 5
    - os: linux
      compiler: gcc
      env: C_COMPILER=gcc-5 CXX_COMPILER=g++-5
      addons:
        apt:
          sources:
            - boost-latest
            - ubuntu-toolchain-r-test
          packages:
            - gcc-5
            - g++-5
            - libboost1.55-dev
            - libboost-filesystem1.55-dev
            - libboost-iostreams1.55-dev
            - libboost-program-options1.55-dev
            - libboost-regex1.55-dev
            - libboost-log1.55-dev
            - ninja-build

    # GCC 6
    - os: linux
      compiler: gcc
      env: C_COMPILER=gcc-6 CXX_COMPILER=g++-6
      addons:
        apt:
          sources:
            - boost-latest
            - ubuntu-toolchain-r-test
          packages:
            - gcc-6
            - g++-6
            - libboost1.55-dev
            - libboost-filesystem1.55-dev
            - libboost-iostreams1.55-dev
            - libboost-program-options1.55-dev
            - libboost-regex1.55-dev
            - libboost-log1.55-dev
            - ninja-build

    - stage: "Release Builds"
      # OSX Release
      os: osx
      osx_image: xcode9.3
      env: C_COMPILER=clang CXX_COMPILER=clang++
      before_install:
        - brew install ninja
      if: tag IS present
      deploy:
        provider: releases
        api_key: $GITHUB_TOKEN
        file:
            - bin/vcf_validator_macos
            - bin/vcf_debugulator_macos
            - bin/vcf_assembly_checker_macos
        skip_cleanup: true
        on:
            repo: EBIvariation/vcf-validator
            tags: true

      # Linux Release
    - os: linux
      compiler: gcc
      env: C_COMPILER=gcc-6 CXX_COMPILER=g++-6
      if: tag IS present
      addons:
        apt:
          sources:
            - boost-latest
            - ubuntu-toolchain-r-test
          packages:
            - gcc-6
            - g++-6
            - libboost1.55-dev
            - libboost-filesystem1.55-dev
            - libboost-iostreams1.55-dev
            - libboost-program-options1.55-dev
            - libboost-regex1.55-dev
            - libboost-log1.55-dev
            - ninja-build
      deploy:
        provider: releases
        api_key: $GITHUB_TOKEN
        file:
            - bin/vcf_validator_linux
            - bin/vcf_debugulator_linux
            - bin/vcf_assembly_checker_linux
        skip_cleanup: true
        on:
            repo: EBIvariation/vcf-validator
            tags: true


before_script:
  - |
    if [[ $TRAVIS_OS_NAME == "linux" ]]; then
      ./install_dependencies.sh
    fi
  - |
    if [[ $TRAVIS_OS_NAME == "osx" ]]; then
      ./install_dependencies.sh osx
    fi

script:
  - cmake -DCMAKE_CXX_COMPILER=${CXX_COMPILER} -DCMAKE_C_COMPILER=${C_COMPILER} ./ -GNinja
  - ninja -v -j2
  - CTEST_OUTPUT_ON_FAILURE=1 ninja test
  - |
      if [[ $TRAVIS_OS_NAME == "osx" ]]; then
        otool -L bin/vcf_validator
      fi

before_deploy:
  - |
      if [[ $TRAVIS_OS_NAME == "linux" ]]; then
        mv bin/vcf_validator bin/vcf_validator_linux
        mv bin/vcf_debugulator bin/vcf_debugulator_linux
        mv bin/vcf_assembly_checker bin/vcf_assembly_checker_linux
      fi
  - |
      if [[ $TRAVIS_OS_NAME == "osx" ]]; then
        mv bin/vcf_validator bin/vcf_validator_macos
        mv bin/vcf_debugulator bin/vcf_debugulator_macos
        mv bin/vcf_assembly_checker bin/vcf_assembly_checker_macos
      fi