NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method("$",Tapestri_Assay)
S3method("$",Tapestri_Multiomics)
S3method("$<-",Tapestri_Assay)
S3method("$<-",Tapestri_Multiomics)
S3method("[[",Tapestri_Assay)
S3method("[[",Tapestri_Multiomics)
S3method("[[<-",Tapestri_Assay)
S3method("[[<-",Tapestri_Multiomics)
S3method(.DollarNames,Tapestri_Assay)
S3method(.DollarNames,Tapestri_Multiomics)
S3method(dim,Tapestri_Assay)
S3method(dim,Tapestri_Multiomics)
S3method(names,Tapestri_Multiomics)
S3method(nrow,Tapestri_Assay)
export(add_analysis_layer)
export(add_assay)
export(add_data_layer)
export(clr_by_cell)
export(clr_by_feature)
export(compute_ploidy)
export(create_assay)
export(create_moo)
export(define_subclones)
export(filter_variants)
export(log_colMeans)
export(log_norm_by_cell)
export(log_norm_by_feature)
export(normalize_dna_reads)
export(read_assay_h5)
export(read_insights_export)
export(read_loom)
export(read_tap)
export(recode_genotypes)
export(subset_assay)
export(tapestri_ploidy_plot)
export(tapestri_scatterplot)
export(tapestri_violinplot)
export(umap_theme)
export(validate_variant_annotations)
exportClasses(Tapestri_Assay)
exportClasses(Tapestri_Multiomics)
import(dplyr)
import(forcats)
import(ggplot2)
import(methods)
import(rhdf5)
import(stringr)
import(tibble)
import(tidyr)
import(utils)
importFrom(EnvStats,geoMean)
importFrom(SciViews,ln)
importFrom(methods,new)