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Error changing z-plane #215

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tischi opened this issue Sep 27, 2024 · 2 comments
Open

Error changing z-plane #215

tischi opened this issue Sep 27, 2024 · 2 comments

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@tischi
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tischi commented Sep 27, 2024

Hi!

I am a surprised that I could not find an issue for this, because I could have sworn that I reported this already.

Anyway, I am getting such errors:

image

Here is the URL that causes this

https://hms-dbmi.github.io/vizarr/?source=https://s3.embl.de/i2k-2020/platy-raw.ome.zarr

And it happens when I am changing the z-plane.

The same dataset opens without error in Fiji and in neuroglancer.

@will-moore
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This is due to vizarr not handling down-sampling in Z. It expects that all resolutions have the same number of Z slices (same limitation in various OME tools too).

@manzt
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manzt commented Oct 1, 2024

I am a surprised that I could not find an issue for this, because I could have sworn that I reported this already.

Yes, I think we could have better error reporting for this. Our previous discussion I believe is here:

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