diff --git a/src/bioat/lib/libfastx.py b/src/bioat/lib/libfastx.py index 035f0eb..500f324 100644 --- a/src/bioat/lib/libfastx.py +++ b/src/bioat/lib/libfastx.py @@ -629,8 +629,8 @@ def cas13_finder( handler.close() # pattern = re.compile(r"R[NHD][A-Z]{3,5}H") - # pattern = re.compile(r"R[NHQD][A-Z]{3,5}H") - pattern = re.compile(r"(R[NHQD][A-Z]{3,5}H|H[A-Z]{3,5}[NHQD]R)") + pattern = re.compile(r"R[NHQD][A-Z]{3,5}H") + # pattern = re.compile(r"(R[NHQD][A-Z]{3,5}H|H[A-Z]{3,5}[NHQD]R)") # R: Arginine # N: Asparagine # H: Histidine