update to 0.12.7 fix matplotlib fonts

pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "bioat"
-version = "0.12.6"
+version = "0.12.7"
 description = "Bioinformatic toolkit with python"
 license = "MIT"
 authors = ["Herman Zhao <[email protected]>"]

src/bioat/lib/libplot.py

@@ -34,6 +34,7 @@
 from matplotlib.font_manager import FontManager
 from matplotlib.patches import Rectangle
 
+from bioat.lib.libpath import HOME
 from bioat.logger import get_logger
 
 # from matplotlib_inline import backend_inline
@@ -100,8 +101,14 @@ def init_matplotlib(log_level='INFO'):
         func_name="init_matplotlib",
     )
     logger.info('Initializing matplotlib')
-    # _copy_fonts(log_level)  # todo, I dont know who is better to copy fonts or add fonts
-    _add_fonts(log_level)
+    try:
+        os.remove(os.path.join(HOME, ".cache", "matplotlib", "fontlist-v330.json"))
+        _add_fonts(log_level)
+        _copy_fonts(
+            log_level
+        )  # todo, I dont know who is better to copy fonts or add fonts
+    except:
+        pass
     logger.debug('ref: https://matplotlib.org/stable/api/style_api.html')
     logger.info("set: plt.style.use('ggplot')  # use ggplot style")
     plt.style.use('ggplot')

src/bioat/version.py

@@ -6,7 +6,7 @@
 project_toml: str = os.path.join(bioat.__path__[0], "version.py")
 sec = os.path.getmtime(project_toml)
 __upgrade_date__ = datetime.date.fromtimestamp(sec)
-__version__ = "0.12.6"
+__version__ = "0.12.7"
 
 __author__ = "Huanan Herman ZHAO @ Tsinghua University"
 __email__ = "hermanzhaozzzz AT gmail.com"

tests/test_bioat.py

@@ -2,7 +2,7 @@
 
 
 def test_version_info():
-    assert bioat.__version__ == "0.12.6"
+    assert bioat.__version__ == "0.12.7"
     assert bioat.__author__ == "Huanan Herman ZHAO @ Tsinghua University"
     assert bioat.__doc_format__ == "sphinx"
     # !same with vscode setting