missing and extra modalities detected by string for subject and timep…

…oint in the

CSVCreator missing and extra modalities lists which are long lived
attributes over iterations through subjects and timepoints

mlcubes/data_preparation/project/stages/get_csv.py

@@ -75,14 +75,14 @@ def execute(self, index: Union[str, int], report: pd.DataFrame) -> pd.DataFrame:
             "data_path": tp_out_path,
             "labels_path": "",
         }
-        if self.csv_processor.subject_timepoint_missing_modalities:
+        if f"{id}_{tp}" in self.csv_processor.subject_timepoint_missing_modalities:
             shutil.rmtree(tp_out_path, ignore_errors=True)
             comment = "There are missing modalities. Please check the data"
             report_data["status"] = -1.1
             report_data["status_name"] = "MISSING_MODALITIES"
             report_data["data_path"] = tp_path
             report_data["comment"] = comment
-        elif self.csv_processor.subject_timepoint_extra_modalities:
+        elif f"{id}_{tp}" in self.csv_processor.subject_timepoint_extra_modalities:
             shutil.rmtree(tp_out_path, ignore_errors=True)
             comment = "There are extra modalities. Please check the data"
             report_data["status"] = -1.2