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Fix_function_category #155

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This PR contains:

  • a new test-case for the benchmark
    • I hereby confirm that NO LLM-based technology (such as github copilot) was used while writing this benchmark
  • new dependencies in requirements.txt
    • The environment.yml file was updated using the command conda env export > environment.yml
  • new generator-functions allowing to sample from other LLMs
  • new samples (sample_....jsonl files)
  • new benchmarking results (..._results.jsonl files)
  • documentation update
  • [X ] bug fixes

Related github issue (if relevant): closes #149

Short description:

  • Fixes the summarize by case notebook.
    The names of the categories were not sorted in same way as mean pass rate. Simplified the code.

How do you think will this influence the benchmark results?

  • Fixes a bug

Why do you think it makes sense to merge this PR?

  • Fixes a bug

marabuuu and others added 30 commits July 8, 2024 12:56
Add 3 new test cases (`identify_centroids`, `find_closest_neighbors`, `load_bgr_tif_and_output_rgb`)
Add `local_maxima_from_distance_transform`, `flow_field_deformation`, and `detect_ellipse` test cases
Added two new test cases: `fit_gaussian_to_spot` and `distance_between_maxima`
haesleinhuepf and others added 29 commits October 14, 2024 13:55
New Test-Case - Metadata Reading plus some basics image processing
[Fixing Test Cases] Allow 0 in label image test cases
[Fixing-Test-Cases] Image Dimensions reading
…ment

Prompt refinement (discussion about if this should be merged or not)
@pr4deepr
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Apologies about all the commits, I used the development test case branch
This is the commit of interest: 0957819

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Issue with function categories
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