From 4c4e2247dcc07863472873ede9fcdcdc1ef814fa Mon Sep 17 00:00:00 2001
From: Arya Massarat <23412689+aryarm@users.noreply.github.com>
Date: Tue, 31 Oct 2023 18:34:53 -0700
Subject: [PATCH] simply try removing version declaration in doc/conf.py

---
 .github/workflows/tests.yml | 4 ++++
 PUBLISHING.rst              | 5 +----
 doc/conf.py                 | 5 -----
 3 files changed, 5 insertions(+), 9 deletions(-)

diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml
index 8b85dd0c..681f0d51 100644
--- a/.github/workflows/tests.yml
+++ b/.github/workflows/tests.yml
@@ -2,6 +2,10 @@ name: Test with pytest
 
 on: [pull_request, workflow_call]
 
+concurrency:
+  group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
+  cancel-in-progress: true
+
 jobs:
   tests:
     name: Test with py${{ matrix.python-version }}
diff --git a/PUBLISHING.rst b/PUBLISHING.rst
index a27ae5ed..2753e56b 100644
--- a/PUBLISHING.rst
+++ b/PUBLISHING.rst
@@ -22,7 +22,7 @@ New Dependencies
 ----------------
 If you've added dependencies to trtools or its tests, those dependencies should be listed in
 
-  * setup.py
+  * pyproject.toml
   * the .readthedocs_conda_env.yml file in the root of the repository that's used for building
     TRTool's Read The Docs webpage.
   * the appropriate section of the bioconda recipe (see below)
@@ -45,9 +45,6 @@ Then go through the steps of merging the changes into the master branch:
 #. Run :code:`pytest` and make sure all the tests pass. Then run :code:`./test/cmdline_tests.sh` and make sure those tests pass.
 #. Change the 'Unreleased Changes' section of :code:`RELEASE_NOTES.rst` to the new version number.
 #. Check if any changes have been made that have not yet been documented in the release notes. If so, document them.
-#. Update the version number in setup.py
-#. Run ``python setup.py sdist bdist_wheel`` (this ensures that trtools/version.py contains the updated version number)
-#. Commit the changes to setup.py and trtools/version.py and push them.
 #. Submit a pull request from develop into master on the github webiste.
 #. If the code review and travis checks pass, merge the pull request.
 #. Tag the merge commit with the package version in vX.Y.Z format. (For more details on tagging, see `below`)
diff --git a/doc/conf.py b/doc/conf.py
index 6874733d..0ac50598 100644
--- a/doc/conf.py
+++ b/doc/conf.py
@@ -13,7 +13,6 @@
 import os
 import sys
 sys.path.insert(0, os.path.abspath('..'))
-import trtools.version
 
 # -- Project information -----------------------------------------------------
 
@@ -21,10 +20,6 @@
 copyright = '2020, Gymreklab'
 author = 'Gymreklab'
 
-# The full version, including alpha/beta/rc tags
-version = trtools.version.version
-release = trtools.version.version
-
 master_doc = 'index'
 
 # -- General configuration ---------------------------------------------------