Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

"Cannot compute median of an empty list" after reducing --gene-length to 1 #84

Open
js72587 opened this issue Aug 18, 2023 · 0 comments

Comments

@js72587
Copy link

js72587 commented Aug 18, 2023

I was trying to reduce --gene-length from its default value of 500 down to 1 to observe differences if we hypothetically included more genes, but am getting the error:

Invalid range Cannot compute median of an empty list

I also tried the values of 5, 10, 50, and 75. It wasn't until I tried 75 that the error stopped and the output file was produced. Could someone please explain why? I thought that reducing down to 1, 5, 10, or 50 would just include more genes; why is the "list" now empty (according to the error message)?

Thank you very much!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant