changelog.md

Changelog

Verion 1.7

• Version 1.6 - updated bioframe to v0.6.2

Cached Location:

/groups/gerlich/labinfo/Methods/singularity_images/gerlich_jupyter_version-1.7.sif

Singularity image URL:

https://singularity.vbc.ac.at/v1/imagefile/library/gerlichlab/jupyter-gerlich:main

Verion 1.6

• Version 1.5 - updated jupyterlab and batch spawner

Verion 1.5

• Version 1.4 + opencv, umap and shap

Chached Location:

/groups/gerlich/labinfo/Methods/singularity_images/jupyter-gerlich:version-1.5

Singularity image URL:

https://singularity.vbc.ac.at/v1/imagefile/library/gerlichlab/jupyter-gerlich:version-1.5

Verion 1.4

• Version that supports to read ROI files .zip or .roi generated with ImageJ

Cached Location:

/groups/gerlich/labinfo/Methods/singularity_images/jupyter-gerlich:version-1.4

Singularity image URL:

https://singularity.vbc.ac.at/v1/imagefile/library/gerlichlab/jupyter-gerlich:version-1.4

Verion 1.3

• Fixed bug in ngs package

Cached Location:

/groups/gerlich/labinfo/Methods/singularity_images/jupyter-gerlich:version-1.3

Singularity image URL:

https://singularity.vbc.ac.at/v1/imagefile/library/gerlichlab/jupyter-gerlich:version-1.3

Verion 1.2

• Version with sparse package installed for dask access of coolers

Cached Location:

/groups/gerlich/labinfo/Methods/singularity_images/jupyter-gerlich:version-1.2

Singularity image URL:

https://singularity.vbc.ac.at/v1/imagefile/library/gerlichlab/jupyter-gerlich:version-1.2

Verion 1.1

• Version with singularity terminal support

Cached Location:

/groups/gerlich/labinfo/Methods/singularity_images/jupyter-gerlich:version-1.1

Singularity image URL:

https://singularity.vbc.ac.at/v1/imagefile/library/gerlichlab/jupyter-gerlich:version-1.1

Version 1.0

• Base version

Cached Location:

/groups/gerlich/labinfo/Methods/singularity_images/jupyter-gerlich:version-1.0

Singularity image URL:

https://singularity.vbc.ac.at/v1/imagefile/library/gerlichlab/jupyter-gerlich:version-1.0