Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[User Story] Export structured data #16

Open
3 tasks
pbiology opened this issue Oct 19, 2023 · 0 comments
Open
3 tasks

[User Story] Export structured data #16

pbiology opened this issue Oct 19, 2023 · 0 comments
Labels
needs refinement User-Story This is a release feature

Comments

@pbiology
Copy link
Contributor

Need

As a bioinformatician I would like to be able to export the results in a structured data format, such as JSON, so I could upload this to my local LIMS.

Suggested approach

This we should try to refine to better understand what is the need here, especially in terms of workflow.

What data should be part of such an export? Is it just the raw data from the pipeline, or is it also historical data and notes etc.

Can be closed when

  • We fully understand what such structured data should contain, and for what purpose
  • Understand who will do this (Bioinformatician, clinician, lab, etc)
  • Decide if this should come from the pipeline or the visualisation tool

Blockers

No response

Anything else?

No response

@pbiology pbiology added the User-Story This is a release feature label Oct 19, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
needs refinement User-Story This is a release feature
Projects
None yet
Development

No branches or pull requests

1 participant