From b755effca18ddc9deede0b3a7db7f394727849bb Mon Sep 17 00:00:00 2001 From: AmstlerStephan <96417996+AmstlerStephan@users.noreply.github.com> Date: Tue, 5 Mar 2024 15:36:12 +0100 Subject: [PATCH] Add files via upload --- docs/images/umi-pipeline-nf_metro-map.svg | 4 ++++ 1 file changed, 4 insertions(+) create mode 100644 docs/images/umi-pipeline-nf_metro-map.svg diff --git a/docs/images/umi-pipeline-nf_metro-map.svg b/docs/images/umi-pipeline-nf_metro-map.svg new file mode 100644 index 0000000..bbf4b8b --- /dev/null +++ b/docs/images/umi-pipeline-nf_metro-map.svg @@ -0,0 +1,4 @@ + + + +
tsv
tsv
Fastq
Fastq
Fastq
Fastq
Fastq
Fastq
Bed
Bed
Fasta
Fasta
Subsample
reads
Subsample...
Filter 
Fastq
Filter...
Map
reads
Map...
Reference
Reference
Reference
coordinates
Reference...
Raw reads
Raw reads
Split
reads
Split...
Extract 
UMIs
Extract...
Cluster UMIs
Cluster UMIs
Parse 
cluster
Parse...
Polish 
cluster
Polish...
Map 
consensus
sequences
Map...
Variant 
calling
Variant...
vcf
vcf
vcf
vcf
bam
bam
bam
bam
tsv
tsv
tsv
tsv
Variant
calling
Variant...
Consensus
sequences
Consensus...
Log
files
Log...
Consensus sequences
Consensus sequences
Re-polished consensus sequences
Re-polished consensus sequences
Mutserve
Mutserve
Lofreq
Lofreq
Freebayes
Freebayes
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