test_mitohpc_fusion.config

/*
========================================================================================
    Nextflow config file for running minimal tests
========================================================================================
    Defines input files and everything required to run a fast and simple pipeline test.
    Use as follows:
        nextflow run main.nf -profile test,development
----------------------------------------------------------------------------------------
*/

params {
    project         = "test-job"
    files           = "$projectDir/tests/data/bam/mitohpc/*.bam"
    output          = "output/mitohpc_fusion"
    detection_limit = 0.03    
    mode            = "fusion"
}