diff --git a/files/minimac4.yaml b/files/minimac4.yaml index 229852b2..24dc6d95 100644 --- a/files/minimac4.yaml +++ b/files/minimac4.yaml @@ -1,7 +1,7 @@ id: imputationserver name: Genotype Imputation (Minimac4) description: This is the new Michigan Imputation Server Pipeline using Minimac4. Documentation can be found here.

If your input data is GRCh37/hg19 please ensure chromosomes are encoded without prefix (e.g. 20).
If your input data is GRCh38hg38 please ensure chromosomes are encoded with prefix 'chr' (e.g. chr20). -version: 1.2.2 +version: 1.2.3 website: https://imputationserver.readthedocs.io category: diff --git a/pom.xml b/pom.xml index 35c4fb6f..974461ed 100644 --- a/pom.xml +++ b/pom.xml @@ -5,7 +5,7 @@ genepi imputationserver - 1.2.2 + 1.2.3 jar University of Michigan Imputation Server diff --git a/src/main/java/genepi/imputationserver/steps/imputation/ImputationPipeline.java b/src/main/java/genepi/imputationserver/steps/imputation/ImputationPipeline.java index a49823f4..5128aef0 100644 --- a/src/main/java/genepi/imputationserver/steps/imputation/ImputationPipeline.java +++ b/src/main/java/genepi/imputationserver/steps/imputation/ImputationPipeline.java @@ -35,7 +35,7 @@ public class ImputationPipeline { private String build = "hg19"; private boolean phasingOnly; - public static final String PIPELINE_VERSION = "michigan-imputationserver-1.2.2"; + public static final String PIPELINE_VERSION = "michigan-imputationserver-1.2.3"; public static final String IMPUTATION_VERSION = "minimac4-1.0.2"; public static final String PHASING_VERSION = "eagle-2.4";