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No index files found for bam file #17

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astulaaa opened this issue Mar 17, 2021 · 0 comments
Open

No index files found for bam file #17

astulaaa opened this issue Mar 17, 2021 · 0 comments

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@astulaaa
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Hello,

Bam file index file ( .bam.bai) is not recognized even though it is in the same directory as the bam file

[INFO] Validate Input...
[ERROR] No index files found for chrMT_1.bam

Error: Execution failed.

Is it a bug? how to go around it? Are there any special parameters that index files mush be generated with in order to be recognized?

Regards,
Asta

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