| layout | id | title | type | fail_mode | status | tags | contact | |
|---|---|---|---|---|---|---|---|---|
rule |
GORULE:0000058 |
Object extensions should conform to the extensions-patterns.yaml file in metadata |
repair |
hard |
implemented |
|
Rules are in the extensions-constraints.yaml file (https://github.com/geneontology/go-site/blob/master/metadata/extensions-constraints.yaml). This is
a list of allowed extension Relation, Filler (the ID inside the parentheses), and
the acceptable GO Term roots used with this relation. A cardinality constraint may also be
applied.
Extensions in annotations should conform to these constraints. If an element of a disjunction in the extensions does not follow one of the constraints as listed in the above file, that element is dropped from the extensions with a warning, and the remaining annotation is kept.
Note that in the GO Central pipeline, this is only implmented upon imports of external annotations into Noctua.