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To make output better organized #1

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fanggang opened this issue May 10, 2016 · 0 comments

fanggang commented May 10, 2016

Better to organize output in a three-layer hierarchy:

Layer 1 named by genome reference

Layer 2 named by motif_pos_SMsn_x or motif_pos_SMp_x where x is additional parameter information to differentiate among runs with different settings.

Layer 3 named by contig names and contig size. Remove '|' from HGAP output

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