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Allow connection of output of step to (specific) input var of another step #137

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raar1 opened this issue Jan 20, 2021 · 1 comment
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raar1 commented Jan 20, 2021

Currently we simply set precedence relations between steps (Step A precedes Step B).

Instead we need to be able to specify that the output of step A is bound to a specific input variable of Step B.

Blocked by #124

@svenvanderburg svenvanderburg changed the title Library should allow connection of output of step to (specific) input var of another step Allow connection of output of step to (specific) input var of another step Jan 20, 2021
@raar1 raar1 added the blocked label Jan 20, 2021
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raar1 commented Jan 24, 2021

I have implemented this (loosely) in PR #146 with triples that 'bind' the output of one step to a specific input of another. However, I generate this from the noodles workflow inside the from_noodles_promise class method, and there is not yet a standard method that allows the connections to be specified. Furthermore, the predicate I am using is made up - we will hopefully learn what the correct way to specify all of this is in the upcoming hackathon (26th Jan).

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