scivision.yaml

sources:
  plankton_single:
      description: Load a single labeled images from CEFAS zooplankton dataset
      origin:
      driver: intake_xarray.image.ImageSource
      parameters:
        kind:
          description: which species to collect
          type: str
          default: Bivalvia-Larvae
        id:
          description: which filename
          type: str
          default: Pia1.2017-10-03.1726+N00296780_hc
      args:
        urlpath: './data/cefas-plankton-dsg-challenge/combined/images/{{kind}}/{{id}}.tif'
        storage_options: {'anon': True}
        exif_tags: True

  plankton_all:
      description: Labeled images from CEFAS zooplankton dataset
      origin:
      driver: intake_xarray.image.ImageSource
      args:
        urlpath: './data/cefas-plankton-dsg-challenge/combined/images/{kind}/{filename}.tif'
        chunks: {}
        storage_options: {'anon': True}
        coerce_shape: [256, 256]
        exif_tags: True
  test_image:
      description: Load a single Koala
      origin:
      driver: intake_xarray.image.ImageSource
      parameters:
        kind:
          description: which species to collect
          type: str
          default: Bivalvia-Larvae
        id:
          description: which filename
          type: str
          default: Pia1.2017-10-03.1726+N00296780_hc
      args:
        urlpath: 'https://upload.wikimedia.org/wikipedia/commons/thumb/2/21/Cutest_Koala.jpg/262px-Cutest_Koala.jpg'
        storage_options: {'anon': True}
        exif_tags: True