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does not run on EMBL cluster anymore #22

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tischi opened this issue Aug 16, 2023 · 2 comments
Open

does not run on EMBL cluster anymore #22

tischi opened this issue Aug 16, 2023 · 2 comments
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tischi commented Aug 16, 2023

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@tischi tischi added the bug Something isn't working label Aug 16, 2023
@tischi tischi self-assigned this Aug 16, 2023
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tischi commented Aug 16, 2023 

[INFO] Saving remote file:
/g/cba/cluster/[login.cluster.embl.de/0725041008/00000.job](http://login.cluster.embl.de/0725041008/00000.job)
[INFO] Establishing SFTP connection to [login.cluster.embl.de](http://login.cluster.embl.de/)...
com.jcraft.jsch.JSchException: session is down
	at com.jcraft.jsch.Session.openChannel(Session.java:861)
	at de.embl.cba.cluster.ssh.SSHConnector.connectChannelSftp(SSHConnector.java:128)
	at de.embl.cba.cluster.ssh.SSHConnector.saveTextAsFileOnRemoteServerUsingSFTP(SSHConnector.java:252)
	at de.embl.cba.cluster.SSHExecutorService.createRemoteJobFile(SSHExecutorService.java:277)
	at de.embl.cba.cluster.SSHExecutorService.submit(SSHExecutorService.java:160)
	at de.embl.cba.cluster.SSHExecutorService.submit(SSHExecutorService.java:152)
	at de.embl.cba.cluster.JobSubmitter.submitJobScript(JobSubmitter.java:163)
	at de.embl.cba.cluster.JobSubmitter.submitJob(JobSubmitter.java:154)
	at

login.cluster.embl.de should be replaced by login01.cluster.embl.de

will this still work without ssh keys?

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tischi commented Aug 16, 2023 •
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Corresponding WIP PR: #23

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