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mvn_install.sh
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mvn_install.sh
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#!/bin/sh
IJ_UTILS="0.6.1"
IMFLOW="0.2.5"
IJ_CLUSTER="0.6.7"
mvn clean package
echo "Copying jars to almf and cba server..."
rm /g/almf/software/Fiji-versions/Fiji-BDVulcan.app/jars/imflow-*
rm /g/almf/software/Fiji-versions/Fiji-BDVulcan.app/jars/bd-cellview-*
rm /g/almf/software/Fiji-versions/Fiji-BDVulcan.app/jars/imagej-utils-*
rm /g/cba/exchange/imflow/jars/imflow-*
rm /g/cba/exchange/imflow/jars/bd-cellview-*
rm /g/cba/exchange/imflow/jars/imagej-utils-*
rm /g/cba/exchange/imflow/jars/imagej-cluster-*
cp /Users/tischer/Documents/bd-cellview/target/bd-cellview-$IMFLOW.jar /g/almf/software/Fiji-versions/Fiji-BDVulcan.app/jars/
cp /Users/tischer/.m2/repository/de/embl/cba/imagej-utils/$IJ_UTILS/imagej-utils-$IJ_UTILS.jar /g/almf/software/Fiji-versions/Fiji-BDVulcan.app/jars/
cp /Users/tischer/Documents/bd-cellview/target/bd-cellview-$IMFLOW.jar /g/cba/exchange/imflow/jars/
cp /Users/tischer/.m2/repository/de/embl/cba/imagej-cluster/$IJ_CLUSTER/imagej-cluster-$IJ_CLUSTER.jar /g/cba/exchange/imflow/jars/
cp /Users/tischer/.m2/repository/de/embl/cba/imagej-utils/$IJ_UTILS/imagej-utils-$IJ_UTILS.jar /g/cba/exchange/imflow/jars/
echo "...done."