small change in outputs of spaceranger v2

[briglo]

Hi Im not sure if anyone else has had this issue. But in trying to generate sce using readVisium i came across the following issue.

• tissue_positions_list.csv has been changed to tissue_positions.csv and now has a header

not a deal breaker but did require a change to the function.

[sanchezy]

Hi, I encounter the same problem. What would be the best way to get around this "small" problem on the new format that spaceranger gives as an output? Many thanks

• tissue_positions_list.csv has been changed to tissue_positions.csv and now has a header

[edward130603]

Apologies for the late response. Please see the newest version on GitHub that addresses this. The bioconductor version of the package will address this in a future version as well.