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Ontology dropdown options not shown in ingest-ui #1040

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arschat opened this issue Sep 5, 2024 · 1 comment
Open
3 of 7 tasks

Ontology dropdown options not shown in ingest-ui #1040

arschat opened this issue Sep 5, 2024 · 1 comment
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bug Something isn't working HCA for HCA project Submissions

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@arschat
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arschat commented Sep 5, 2024

Describe the bug

In ingest-ui, in some ontology fields, the dropdown menu does not show any value.

list of ontologies that are not shown in ingest-ui
  • project -> "organ"
  • donor ->
    • donor_organism.mouse_specific.strain
    • donor_organism.length_unit
    • donor_organism.mass_unit
  • specimen ->
    • specimen_from_organism.organ
    • specimen_from_organism.organ_part
  • cell line ->
    • cell_line.cell_cycle

To Reproduce
Steps to reproduce the behaviour:

  1. Go to any project in dev or staging ingest, example.
  2. Click on any of the aforementioned biomaterial from the list
  3. Select the ontology field that was recorded to have problems (see list)
  4. Ingest-ui will not provide options even if you write down an example

Expected behaviour

ingest-ui should provide a dropdown menu with a list of the available ontologies that is filtered after the user provides some text

Screenshots / Logs
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Environment

  • prod
  • staging
  • dev

Browser

  • Chrome
  • Safari
  • IE
  • Other (please specify)
@arschat arschat added bug Something isn't working HCA for HCA project labels Sep 5, 2024
@amnonkhen
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amnonkhen commented Sep 16, 2024

Investigation steps:

  • 1. reproduce on dev - connected currently to ols4 prod
  • 2. reproduce running ui locally connected to ingest dev, ols4 dev
  • 3. reproduce running ui locally connected to ingest dev, ols4 prod
  • 4. decide next steps

@amnonkhen amnonkhen self-assigned this Sep 16, 2024
@idazucchi idazucchi added Submissions HCA for HCA project and removed HCA for HCA project labels Sep 20, 2024
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