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Project 1: Nextflow Pipeline for ONT Long Reads Metatrascriptomic data analysis #1
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This is my third choice. Reasons:
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MY THIRD OPTION: |
THIRD CHOICE
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First ChoiceReasons:
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FIRST CHOICE
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Second ChoiceMy reasons:
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FIRST CHOICE
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The third choiceI have a keen interest in differential gene expression as a proxy of certain conditions (depending on the biological question of interest) and analysis of meta-transcriptomics and transcriptomics data. This project would be an ideal exposure to working with meta-transcriptomics data, with a particular focus on how to go about standardising a Nextflow workflow on such analysis. This would hone my understanding of the Nextflow language, which would be salient in my future work in developing reproducible research. |
This my first choice: |
MY FIRST CHOICE An opportunity: |
Second ChoiceFor this project, I am particularly interested and would be keen on containerization and scaling the Nextflow workflow in the cloud. I will be looking forward to utilizing the Kubernetes service and exploring various ways to fully exploit the power provided by a multi-core threaded computing environment |
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