From ff1f5043d315cec7623fb6f5f2392be705d1f449 Mon Sep 17 00:00:00 2001 From: sven-h Date: Fri, 8 Mar 2024 20:59:22 +0000 Subject: [PATCH 1/2] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20dwsl?= =?UTF-8?q?ab/melt@963bc647a13c52d75545839d846a63f3f8d5c304=20=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- javadoc_latest/allclasses-index.html | 256 +++++++++--------- .../TrackRepository.MLDatasets.html | 192 +++++++++++++ .../melt/matching_data/TrackRepository.html | 35 ++- .../melt/matching_data/class-use/Track.html | 120 ++++---- .../class-use/TrackRepository.MLDatasets.html | 61 +++++ .../melt/matching_data/package-summary.html | 46 ++-- .../dws/melt/matching_data/package-tree.html | 1 + javadoc_latest/index-all.html | 14 + javadoc_latest/member-search-index.js | 2 +- javadoc_latest/overview-tree.html | 1 + javadoc_latest/type-search-index.js | 2 +- 11 files changed, 512 insertions(+), 218 deletions(-) create mode 100644 javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/TrackRepository.MLDatasets.html create mode 100644 javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/class-use/TrackRepository.MLDatasets.html diff --git a/javadoc_latest/allclasses-index.html b/javadoc_latest/allclasses-index.html index ba442af6d5..0aa8b76b9a 100644 --- a/javadoc_latest/allclasses-index.html +++ b/javadoc_latest/allclasses-index.html @@ -1941,244 +1941,248 @@

All Classes and Interfaces<
HOBBIT Link Discovery.
-
TrackRepository.MSE
+
TrackRepository.MLDatasets
-
Material Sciences and Engineering track.
+
ML Datasets
-
TrackRepository.Multifarm
+
TrackRepository.MSE
-
Multifarm track.
+
Material Sciences and Engineering track.
-
TrackRepository.Pharmacogenomics
+
TrackRepository.Multifarm
-
Pharmacogenomics (pgx).
+
Multifarm track.
-
TrackRepository.Phenotype
+
TrackRepository.Pharmacogenomics
-
Disease and Phenotype track.
+
Pharmacogenomics (pgx).
-
TrackRepository.Phenotype.V2016
+
TrackRepository.Phenotype
-
2016 version of DiseasePhenotype Track
+
Disease and Phenotype track.
-
TrackRepository.Phenotype.V2017
+
TrackRepository.Phenotype.V2016
-
2017 version of DiseasePhenotype Track (HP_MP and DOID_ORDO also used in 2018)
+
2016 version of DiseasePhenotype Track
-
TrackRepository.ProcessMatching
+
TrackRepository.Phenotype.V2017
+
2017 version of DiseasePhenotype Track (HP_MP and DOID_ORDO also used in 2018)
+
+
TrackRepository.ProcessMatching
+
Process Matching Track (last run in 2017) For more info see Process Matching Track Website
-
TrackRepository.Spimbench
-
+
TrackRepository.Spimbench
+
HOBBIT Spimbench The goal of this track is to determine when two OWL instances describe the same Creative Work.
-
TrackRepository.SystematicBenchmark
-
 
-
TrackRepository.SystematicBenchmark.Biblio
+
TrackRepository.SystematicBenchmark
 
-
TrackRepository.SystematicBenchmark.Biblio.V2016
+
TrackRepository.SystematicBenchmark.Biblio
 
-
TrackRepository.SystematicBenchmark.Film
+
TrackRepository.SystematicBenchmark.Biblio.V2016
 
-
TrackRepository.SystematicBenchmark.Film.V2016
+
TrackRepository.SystematicBenchmark.Film
 
-
TrackValidationService
-
+
TrackRepository.SystematicBenchmark.Film.V2016
+
 
+
TrackValidationService
+
This class analyzes a track (i.e., its individual test cases).
-
TrainingAlignmentGenerator
-
Deprecated. +
TrainingAlignmentGenerator
+
Deprecated.
replacement is to use AddNegativesViaMatcher which has the same functionality (but it really uses only correspondences with equivalence relation as positive correspondences) .
-
TrainTestSplit<T>
-
+
TrainTestSplit<T>
+
A class which can do a train test split for arbitrary data items.
-
TrainTestSplitAlignment
-
+
TrainTestSplitAlignment
+
A class which can do a train test split for arbitrary data items.
-
TransformationEdge
-
 
-
TransformationRoute<T>
+
TransformationEdge
 
-
TransformersArguments
-
+
TransformationRoute<T>
+
 
+
TransformersArguments
+
This class represents the arguments for the transformers library.
-
TransformersBase
-
+
TransformersBase
+
This is a base class for all Transformers.
-
TransformersBaseFineTuner
-
+
TransformersBaseFineTuner
+
This is a base class for all Transformers fine tuners.
-
TransformersFilter
-
+
TransformersFilter
+
This filter extracts the corresponding text for a resource (with the specified and customizable extractor) given all correspondences in the input alignment.
-
TransformersFineTuner
-
+
TransformersFineTuner
+
This class is used to fine-tune a transformer model based on a generated dataset.
-
TransformersFineTunerHpSearch
-
 
-
TransformersHpSearchSpace
-
+
TransformersFineTunerHpSearch
+
 
+
TransformersHpSearchSpace
+
This class represents the search space for hyper parameters.
-
TransformersMultiProcessing
-
+
TransformersMultiProcessing
+
The transformers library may not free all memory from GPU.
-
TransformersOptimizingMetric
-
+
TransformersOptimizingMetric
+
The enum which represents the possible measure for evaluating a model during hyperparameter search.
-
TransitiveClosure<T>
-
+
TransitiveClosure<T>
+
Computes a transitive closure in RAM.
-
TypeFilter
-
+
TypeFilter
+
Filters only class, instance or property matches.
-
TypeRefiner
-
+
TypeRefiner
+
The type refiner is capable of refining an ExecutionResult according to types.
-
TypeTransformationException
-
+
TypeTransformationException
+
The exception which is thrown if a transformation does not work.
-
TypeTransformer<S,T>
-
+
TypeTransformer<S,T>
+
TypeTransformer interface.
-
TypeTransformerHelper
-
+
TypeTransformerHelper
+
Helper functions for type transformation to URL.
-
TypeTransformerLoader
-
+
TypeTransformerLoader
+
Implement this interface to register multiple TypeTransformers.
-
TypeTransformerRegistry
-
+
TypeTransformerRegistry
+
The TypeTransformerRegistry is a registry for TypeTransformer which can transform an objetc of one type/class to another.
-
UriInterfaceWrapper
-
+
UriInterfaceWrapper
+
This matcher implements the URL interface and wrapps a MatcherYAAA.
-
URIUtil
-
+
URIUtil
+
Provides utility functions for URIs such as getting the fragment
-
URL2AlignmentTransformer
-
 
-
URL2OntModelTransformer
+
URL2AlignmentTransformer
 
-
URL2OWLOntology
-
+
URL2OntModelTransformer
+
 
+
URL2OWLOntology
+
Converts the URL to the owlapi OWLOntology
-
URL2PropertiesTransformer
-
+
URL2PropertiesTransformer
+
Transforms a URI to java.uril.Properties.
-
VectorDistance
-
+
VectorDistance
+
Interface for classes that are able to calculate vector distances.
-
VectorOperations
-
+
VectorOperations
+
Some utility provided in the form of static methods for vector operations.
-
VectorSpaceModelMatcher
-
+
VectorSpaceModelMatcher
+
Updates the confidence of already matched resources.
-
VOSClusteringTechnique
-
 
-
WebIsAlodClassicKnowledgeSource
-
+
VOSClusteringTechnique
+
 
+
WebIsAlodClassicKnowledgeSource
+
WebIsAlod Knowledge source.
-
WebIsAlodClassicLinker
-
+
WebIsAlodClassicLinker
+
This linker can link strings to dictionary entries.
-
WebIsAlodEmbeddingLinker
-
+
WebIsAlodEmbeddingLinker
+
Linker for WebIsALOD Embeddings
-
WebIsAlodSPARQLservice
-
+
WebIsAlodSPARQLservice
+
This class performs SPARQL queries for the WebIsALOD data set.
-
WebIsAlodSPARQLservice.WebIsAlodEndpoint
-
+
WebIsAlodSPARQLservice.WebIsAlodEndpoint
+
Enumeration of the two available endpoints.
-
WebIsAlodXLKnowledgeSource
-
 
-
WebIsAlodXLLinker
+
WebIsAlodXLKnowledgeSource
 
-
WikidataEmbeddingLinker
-
+
WebIsAlodXLLinker
+
 
+
WikidataEmbeddingLinker
+
Link to Wikidata embeddings using the "normal" Wikidata linker (WikidataLinker.
-
WikidataKnowledgeSource
-
 
-
WikidataLinker
-
+
WikidataKnowledgeSource
+
 
+
WikidataLinker
+
This linker links strings to Wikidata concepts.
-
WiktionaryEmbeddingLinker
-
 
-
WiktionaryKnowledgeSource
-
+
WiktionaryEmbeddingLinker
+
 
+
WiktionaryKnowledgeSource
+
Class utilizing DBnary, a SPARQL endpoint for Wiktionary.
-
WiktionaryLinker
-
+
WiktionaryLinker
+
This linker can link strings to dictionary entries.
-
WiktionarySynsetCSV
-
+
WiktionarySynsetCSV
+
Generates a CSV (first element is source - all others are synonyms) based on a DBnary dump file.
-
Word2VecConfiguration
-
+
Word2VecConfiguration
+
The configuration for the word2vec calculation.
-
Word2VecType
-
+
Word2VecType
+
Type of word2vec model/approach like CBOW or SG.
-
WordNetEmbeddingLinker
-
+
WordNetEmbeddingLinker
+
For this linker, you need (1) a WordNet embedding, (2) a text file of the vocabulary.
-
WordNetKnowledgeSource
-
+
WordNetKnowledgeSource
+
API for WordNet requests.
-
WordNetLinker
-
+
WordNetLinker
+
This class is capable of linking words to concepts in WordNet.
-
WriteMainMatcherClassToFile
-
 
-
WriteNumpy
-
+
WriteMainMatcherClassToFile
+
 
+
WriteNumpy
+
Write array like objects to file which can be read in python with numpy.
diff --git a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/TrackRepository.MLDatasets.html b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/TrackRepository.MLDatasets.html new file mode 100644 index 0000000000..3d92a296af --- /dev/null +++ b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/TrackRepository.MLDatasets.html @@ -0,0 +1,192 @@ + + + + +TrackRepository.MLDatasets (MELT - Matching EvaLuation Toolkit 3.4-SNAPSHOT API) + + + + + + + + + + + + + + +
+ +
+
+ +
+
Package de.uni_mannheim.informatik.dws.melt.matching_data
+

Class TrackRepository.MLDatasets

+
+
java.lang.Object +
de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MLDatasets
+
+
+
+
Enclosing class:
+
TrackRepository
+
+
+
public static class TrackRepository.MLDatasets +extends Object
+
ML Datasets
+
+
+ +
+
+
    + +
  • +
    +

    Field Details

    +
      +
    • +
      +

      AnatomyDefault

      +
      public static Track AnatomyDefault
      +
      +
      • +
    • +
      +

      Biodiv_V2023

      +
      public static Track Biodiv_V2023
      +
      +
      • +
    • +
      +

      BioML_2022

      +
      public static Track BioML_2022
      +
      +
      • +
    • +
      +

      KG_V4

      +
      public static Track KG_V4
      +
      +
      • +
    +
    +
    • + +
  • +
    +

    Constructor Details

    +
      +
    • +
      +

      MLDatasets

      +
      public MLDatasets()
      +
      +
      • +
    +
    +
    • +
+
+ +
+
+
+

Copyright © 2024. All rights reserved.

+
+
+
+ + diff --git a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/TrackRepository.html b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/TrackRepository.html index ae740951e0..c0d3b30414 100644 --- a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/TrackRepository.html +++ b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/TrackRepository.html @@ -164,40 +164,45 @@

Nested Class Summary

HOBBIT Link Discovery.
static class 
-
TrackRepository.MSE
+
TrackRepository.MLDatasets
-
Material Sciences and Engineering track.
+
ML Datasets
static class 
-
TrackRepository.Multifarm
+
TrackRepository.MSE
-
Multifarm track.
+
Material Sciences and Engineering track.
static class 
-
TrackRepository.Pharmacogenomics
+
TrackRepository.Multifarm
-
Pharmacogenomics (pgx).
+
Multifarm track.
static class 
-
TrackRepository.Phenotype
+
TrackRepository.Pharmacogenomics
-
Disease and Phenotype track.
+
Pharmacogenomics (pgx).
static class 
-
TrackRepository.ProcessMatching
+
TrackRepository.Phenotype
-
Process Matching Track (last run in 2017) - For more info see Process Matching Track Website
+
Disease and Phenotype track.
static class 
-
TrackRepository.Spimbench
+
TrackRepository.ProcessMatching
+
Process Matching Track (last run in 2017) + For more info see Process Matching Track Website
+
+
static class 
+
TrackRepository.Spimbench
+
HOBBIT Spimbench The goal of this track is to determine when two OWL instances describe the same Creative Work.
-
static class 
-
TrackRepository.SystematicBenchmark
-
 
+
static class 
+
TrackRepository.SystematicBenchmark
+
 
diff --git a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/class-use/Track.html b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/class-use/Track.html index 9d13856289..274ee5d996 100644 --- a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/class-use/Track.html +++ b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/class-use/Track.html @@ -116,150 +116,162 @@

Uses of
All multifarm testcases in one track.

-
static final Track
-
TrackRepository.ProcessMatching.BR
+
static Track
+
TrackRepository.MLDatasets.AnatomyDefault
 
static Track
-
TrackRepository.Knowledgegraph.CommonKG
-
+
TrackRepository.MLDatasets.Biodiv_V2023
+
 
+
static Track
+
TrackRepository.MLDatasets.BioML_2022
+
 
+
static final Track
+
TrackRepository.ProcessMatching.BR
+
 
+
static Track
+
TrackRepository.Knowledgegraph.CommonKG
+
Deprecated.
better use
-
static Track
-
TrackRepository.Conference.ConferenceDBpedia
-
-
Experimental Track for conference which maps conference ontologies to DBpedia.
-
static Track
-
TrackRepository.Anatomy.Default
+
TrackRepository.Conference.ConferenceDBpedia
-
Default Anatomy Testsuite which is used all the time.
+
Experimental Track for conference which maps conference ontologies to DBpedia.
static Track
-
TrackRepository.Biodiv.Default
+
TrackRepository.Anatomy.Default
-
Default Testsuite which is used all the time.
+
Default Anatomy Testsuite which is used all the time.
static Track
-
TrackRepository.Link.Default
+
TrackRepository.Biodiv.Default
-
The default HOBBIT Link Discovery Task
+
Default Testsuite which is used all the time.
static Track
-
TrackRepository.Phenotype.V2016.DOID_ORDO
+
TrackRepository.Link.Default
-
This task consists of matching the DOID (9,301 entities) and ORDO (12,974) ontologies.
+
The default HOBBIT Link Discovery Task
static Track
-
TrackRepository.Phenotype.V2017.DOID_ORDO
+
TrackRepository.Phenotype.V2016.DOID_ORDO
-
This task consists of matching the DOID (38,240 classes) and ORDO (13,504) ontologies.
+
This task consists of matching the DOID (9,301 entities) and ORDO (12,974) ontologies.
static Track
-
TrackRepository.BioML.V2022.EQUIV_SUPERVISED
-
 
+
TrackRepository.Phenotype.V2017.DOID_ORDO
+
+
This task consists of matching the DOID (38,240 classes) and ORDO (13,504) ontologies.
+
static Track
-
TrackRepository.BioML.V2022.EQUIV_UNSUPERVISED
+
TrackRepository.BioML.V2022.EQUIV_SUPERVISED
 
static Track
-
TrackRepository.Largebio.V2015.FMA_NCI_SMALL
-
-
Task 1: FMA-NCI small fragments: - This task consists of matching two (relatively) small fragments of FMA and NCI.
-
+
TrackRepository.BioML.V2022.EQUIV_UNSUPERVISED
+
 
static Track
-
TrackRepository.Largebio.V2016.FMA_NCI_SMALL
+
TrackRepository.Largebio.V2015.FMA_NCI_SMALL
Task 1: FMA-NCI small fragments: This task consists of matching two (relatively) small fragments of FMA and NCI.
static Track
-
TrackRepository.Largebio.V2015.FMA_NCI_SMALL_FLAGGED
+
TrackRepository.Largebio.V2016.FMA_NCI_SMALL
Task 1: FMA-NCI small fragments: This task consists of matching two (relatively) small fragments of FMA and NCI.
static Track
-
TrackRepository.Largebio.V2015.FMA_NCI_WHOLE
+
TrackRepository.Largebio.V2015.FMA_NCI_SMALL_FLAGGED
-
Task 2: FMA-NCI whole ontologies.
+
Task 1: FMA-NCI small fragments: + This task consists of matching two (relatively) small fragments of FMA and NCI.
static Track
-
TrackRepository.Largebio.V2016.FMA_NCI_WHOLE
+
TrackRepository.Largebio.V2015.FMA_NCI_WHOLE
Task 2: FMA-NCI whole ontologies.
static Track
-
TrackRepository.Largebio.V2015.FMA_NCI_WHOLE_FLAGGED
+
TrackRepository.Largebio.V2016.FMA_NCI_WHOLE
Task 2: FMA-NCI whole ontologies.
static Track
-
TrackRepository.Largebio.V2015.FMA_SNOMED_SMALL
+
TrackRepository.Largebio.V2015.FMA_NCI_WHOLE_FLAGGED
-
Task 3: FMA-SNOMED small fragments.
+
Task 2: FMA-NCI whole ontologies.
static Track
-
TrackRepository.Largebio.V2016.FMA_SNOMED_SMALL
+
TrackRepository.Largebio.V2015.FMA_SNOMED_SMALL
Task 3: FMA-SNOMED small fragments.
static Track
-
TrackRepository.Largebio.V2015.FMA_SNOMED_SMALL_FLAGGED
+
TrackRepository.Largebio.V2016.FMA_SNOMED_SMALL
Task 3: FMA-SNOMED small fragments.
static Track
-
TrackRepository.Largebio.V2015.FMA_SNOMED_WHOLE
+
TrackRepository.Largebio.V2015.FMA_SNOMED_SMALL_FLAGGED
-
Task 4: FMA whole ontology.
+
Task 3: FMA-SNOMED small fragments.
static Track
-
TrackRepository.Largebio.V2016.FMA_SNOMED_WHOLE
+
TrackRepository.Largebio.V2015.FMA_SNOMED_WHOLE
Task 4: FMA whole ontology.
static Track
-
TrackRepository.Largebio.V2015.FMA_SNOMED_WHOLE_FLAGGED
+
TrackRepository.Largebio.V2016.FMA_SNOMED_WHOLE
Task 4: FMA whole ontology.
static Track
-
TrackRepository.Complex.GeoLink
+
TrackRepository.Largebio.V2015.FMA_SNOMED_WHOLE_FLAGGED
-
This dataset is from the GeoLink project, which was funded under the U.S.
+
Task 4: FMA whole ontology.
static Track
-
TrackRepository.InstanceMatching.GeoLinkCruise
+
TrackRepository.Complex.GeoLink
-
GeoLinkCruise
+
This dataset is from the GeoLink project, which was funded under the U.S.
static Track
-
TrackRepository.Phenotype.V2017.HP_MESH
+
TrackRepository.InstanceMatching.GeoLinkCruise
-
Deprecated. 
+
GeoLinkCruise
static Track
-
TrackRepository.Phenotype.V2016.HP_MP
+
TrackRepository.Phenotype.V2017.HP_MESH
-
This task consists of matching the HP (11,828 entities) and MP (11,752 entities) ontologies.
+
Deprecated. 
static Track
-
TrackRepository.Phenotype.V2017.HP_MP
+
TrackRepository.Phenotype.V2016.HP_MP
-
This task consists of matching the HP (31,034 classes) and MP (30,273 entities) ontologies.
+
This task consists of matching the HP (11,828 entities) and MP (11,752 entities) ontologies.
static Track
-
TrackRepository.Phenotype.V2017.HP_OMIM
+
TrackRepository.Phenotype.V2017.HP_MP
-
Deprecated. 
+
This task consists of matching the HP (31,034 classes) and MP (30,273 entities) ontologies.
static Track
-
TrackRepository.Complex.Hydrography
+
TrackRepository.Phenotype.V2017.HP_OMIM
+
Deprecated. 
+
+
static Track
+
TrackRepository.Complex.Hydrography
+
The hydrography dataset is composed of four source ontologies (Hydro3, HydrOntology_native, HydrOntology_translated, and Cree) that each should be aligned to a single target Surface Water Ontology (SWO).
+
static Track
+
TrackRepository.MLDatasets.KG_V4
+
 
static Track
TrackRepository.CommonKG.NELL_DBPEDIA_V1
diff --git a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/class-use/TrackRepository.MLDatasets.html b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/class-use/TrackRepository.MLDatasets.html new file mode 100644 index 0000000000..d3a1f02910 --- /dev/null +++ b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/class-use/TrackRepository.MLDatasets.html @@ -0,0 +1,61 @@ + + + + +Uses of Class de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MLDatasets (MELT - Matching EvaLuation Toolkit 3.4-SNAPSHOT API) + + + + + + + + + + + + + + +
+ +
+
+
+

Uses of Class
de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MLDatasets

+
+No usage of de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MLDatasets
+
+
+

Copyright © 2024. All rights reserved.

+
+
+
+ + diff --git a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/package-summary.html b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/package-summary.html index c4171aa9ea..e2318128b1 100644 --- a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/package-summary.html +++ b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/package-summary.html @@ -189,50 +189,54 @@

HOBBIT Link Discovery.

-
TrackRepository.MSE
+
TrackRepository.MLDatasets
-
Material Sciences and Engineering track.
+
ML Datasets
-
TrackRepository.Multifarm
+
TrackRepository.MSE
-
Multifarm track.
+
Material Sciences and Engineering track.
-
TrackRepository.Pharmacogenomics
+
TrackRepository.Multifarm
-
Pharmacogenomics (pgx).
+
Multifarm track.
-
TrackRepository.Phenotype
+
TrackRepository.Pharmacogenomics
-
Disease and Phenotype track.
+
Pharmacogenomics (pgx).
-
TrackRepository.Phenotype.V2016
+
TrackRepository.Phenotype
-
2016 version of DiseasePhenotype Track
+
Disease and Phenotype track.
-
TrackRepository.Phenotype.V2017
+
TrackRepository.Phenotype.V2016
-
2017 version of DiseasePhenotype Track (HP_MP and DOID_ORDO also used in 2018)
+
2016 version of DiseasePhenotype Track
-
TrackRepository.ProcessMatching
+
TrackRepository.Phenotype.V2017
+
2017 version of DiseasePhenotype Track (HP_MP and DOID_ORDO also used in 2018)
+
+
TrackRepository.ProcessMatching
+
Process Matching Track (last run in 2017) For more info see Process Matching Track Website
-
TrackRepository.Spimbench
-
+
TrackRepository.Spimbench
+
HOBBIT Spimbench The goal of this track is to determine when two OWL instances describe the same Creative Work.
-
TrackRepository.SystematicBenchmark
-
 
-
TrackRepository.SystematicBenchmark.Biblio
+
TrackRepository.SystematicBenchmark
 
-
TrackRepository.SystematicBenchmark.Biblio.V2016
+
TrackRepository.SystematicBenchmark.Biblio
 
-
TrackRepository.SystematicBenchmark.Film
+
TrackRepository.SystematicBenchmark.Biblio.V2016
 
-
TrackRepository.SystematicBenchmark.Film.V2016
+
TrackRepository.SystematicBenchmark.Film
 
+
TrackRepository.SystematicBenchmark.Film.V2016
+
 
diff --git a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/package-tree.html b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/package-tree.html index 8d2a353663..30c46fed35 100644 --- a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/package-tree.html +++ b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_data/package-tree.html @@ -86,6 +86,7 @@

Class Hierarchy

  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Largebio.V2015
  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Largebio.V2016
  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Link
    • +
  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MLDatasets
  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MSE
  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Multifarm
  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Pharmacogenomics
    • diff --git a/javadoc_latest/index-all.html b/javadoc_latest/index-all.html index 2908a0f8ac..3a9ffbfd41 100644 --- a/javadoc_latest/index-all.html +++ b/javadoc_latest/index-all.html @@ -1182,6 +1182,8 @@

    A

    Anatomy() - Constructor for class de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Anatomy
     
    +
    AnatomyDefault - Static variable in class de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MLDatasets
    +
     
    anchorClass - Variable in class de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator.visualization.dashboard.DcjsElement
     
    anchorStyle - Variable in class de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator.visualization.dashboard.DcjsElement
    @@ -1594,8 +1596,12 @@

    B

     
    Biodiv() - Constructor for class de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Biodiv
     
    +
    Biodiv_V2023 - Static variable in class de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MLDatasets
    +
     
    BioML() - Constructor for class de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.BioML
     
    +
    BioML_2022 - Static variable in class de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MLDatasets
    +
     
    bla(ExecutionResult) - Method in class de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator.metric.cmrelation.CMRelation
     
    BOOLEAN - Enum constant in enum de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.util.SetSimilarity
    @@ -10256,6 +10262,8 @@

    K

    KG_TRACKS - Static variable in class de.uni_mannheim.informatik.dws.melt.matching_eval.multisource.ExecutorMultiSource
     
    +
    KG_V4 - Static variable in class de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MLDatasets
    +
     
    kgOne - Variable in class de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.multisource.dispatchers.MergeExecutor
     
    kgTwo - Variable in class de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.multisource.dispatchers.MergeExecutor
    @@ -12886,6 +12894,8 @@

    M

    The typ of ml split.
    +
    MLDatasets() - Constructor for class de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MLDatasets
    +
     
    MODEL_SIZE_ASCENDING - Static variable in class de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.multisource.dispatchers.MultiSourceDispatcherIncrementalMergeByOrder
    Sorted by the number of triples in a model.
    @@ -19305,6 +19315,10 @@

    T

    HOBBIT Link Discovery.
    +
    TrackRepository.MLDatasets - Class in de.uni_mannheim.informatik.dws.melt.matching_data
    +
    +
    ML Datasets
    +
    TrackRepository.MSE - Class in de.uni_mannheim.informatik.dws.melt.matching_data
    Material Sciences and Engineering track.
    diff --git a/javadoc_latest/member-search-index.js b/javadoc_latest/member-search-index.js index 59a698c869..4e4b847f51 100644 --- a/javadoc_latest/member-search-index.js +++ b/javadoc_latest/member-search-index.js @@ -1 +1 @@ -memberSearchIndex = [{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.external.services.stringOperations","c":"StringOperations.AbbreviationHandler","l":"AbbreviationHandler()","u":"%3Cinit%3E()"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.util","c":"SetSimilarity","l":"ABSOLUTE"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.filter.instance","c":"SimilarHierarchyFilterApproach","l":"ABSOLUTE_MATCHES"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_base.typetransformer","c":"AbstractTypeTransformer","l":"AbstractTypeTransformer(Class, 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b/javadoc_latest/overview-tree.html @@ -797,6 +797,7 @@

    Class Hierarchy

  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Largebio.V2015
  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Largebio.V2016
  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Link
    • +
  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MLDatasets
  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.MSE
  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Multifarm
  • de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Pharmacogenomics
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\ No newline at end of file From cbc0c3f7494461b5c19233df55ce4a8831ce026b Mon Sep 17 00:00:00 2001 From: sven-h Date: Fri, 8 Mar 2024 21:01:52 +0000 Subject: [PATCH 2/2] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20dwsl?= =?UTF-8?q?ab/melt@963bc647a13c52d75545839d846a63f3f8d5c304=20=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .../generated_markdown/1_complete_list_of_matchers.md | 2 +- .../2_complete_list_of_matchers_multi_source.md | 2 +- .../generated_markdown/3_complete_list_of_filters.md | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md b/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md index 60b1b981a5..3e40dd9235 100644 --- a/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md +++ b/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md @@ -528,4 +528,4 @@ Better use MatcherYAAAPipeline because it can combine matchers which use differe *Keywords: MatcherYAAA Owl Api* --- -automatically generated on 2024-03-08 15:32 +automatically generated on 2024-03-08 20:57 diff --git a/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md b/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md index 14fc5feb85..d8deb2da62 100644 --- a/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md +++ b/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md @@ -123,4 +123,4 @@ Matches multiple ontologies / knowledge graphs with an incremental merge approac *Keywords: Multi Source Dispatcher All Pairs* --- -automatically generated on 2024-03-08 15:32 +automatically generated on 2024-03-08 20:57 diff --git a/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md b/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md index 599b51ab7c..ccff45c0a2 100644 --- a/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md +++ b/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md @@ -324,4 +324,4 @@ This is the logmap repair filter. *Keywords: Log Map Repair Filter* --- -automatically generated on 2024-03-08 15:32 +automatically generated on 2024-03-08 20:57