From 1cfbe4e015a416215f0b0f9659d63672e6a4f05b Mon Sep 17 00:00:00 2001 From: sven-h Date: Sun, 15 Sep 2024 18:29:40 +0000 Subject: [PATCH 1/6] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20dwsl?= =?UTF-8?q?ab/melt@2c5e8dd9085ba566226be2c0dc27dfc4f95270f2=20=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .../generated_markdown/1_complete_list_of_matchers.md | 2 +- .../2_complete_list_of_matchers_multi_source.md | 2 +- .../generated_markdown/3_complete_list_of_filters.md | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md b/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md index 86f87d5add..c0e232eb45 100644 --- a/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md +++ b/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md @@ -528,4 +528,4 @@ Better use MatcherYAAAPipeline because it can combine matchers which use differe *Keywords: MatcherYAAA Owl Api* --- -automatically generated on 2024-09-15 16:57 +automatically generated on 2024-09-15 18:25 diff --git a/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md b/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md index 97b7b0376b..5b726f8e41 100644 --- a/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md +++ b/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md @@ -123,4 +123,4 @@ Matches multiple ontologies / knowledge graphs with an incremental merge approac *Keywords: Multi Source Dispatcher All Pairs* --- -automatically generated on 2024-09-15 16:57 +automatically generated on 2024-09-15 18:25 diff --git a/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md b/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md index 11ef0ea92c..e0dfe28020 100644 --- a/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md +++ b/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md @@ -324,4 +324,4 @@ This is the logmap repair filter. *Keywords: Log Map Repair Filter* --- -automatically generated on 2024-09-15 16:57 +automatically generated on 2024-09-15 18:25 From a8eb74e32896f53c9f4225fa17ebbdb33a37107c Mon Sep 17 00:00:00 2001 From: sven-h Date: Sun, 15 Sep 2024 18:33:18 +0000 Subject: [PATCH 2/6] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20dwsl?= =?UTF-8?q?ab/melt@97d9155754928340ac49d2770728dc0af55d5fa1=20=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .../generated_markdown/1_complete_list_of_matchers.md | 2 +- .../2_complete_list_of_matchers_multi_source.md | 2 +- .../generated_markdown/3_complete_list_of_filters.md | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md b/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md index c0e232eb45..f220212f4e 100644 --- a/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md +++ b/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md @@ -528,4 +528,4 @@ Better use MatcherYAAAPipeline because it can combine matchers which use differe *Keywords: MatcherYAAA Owl Api* --- -automatically generated on 2024-09-15 18:25 +automatically generated on 2024-09-15 18:28 diff --git a/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md b/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md index 5b726f8e41..e7f9190e11 100644 --- a/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md +++ b/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md @@ -123,4 +123,4 @@ Matches multiple ontologies / knowledge graphs with an incremental merge approac *Keywords: Multi Source Dispatcher All Pairs* --- -automatically generated on 2024-09-15 18:25 +automatically generated on 2024-09-15 18:28 diff --git a/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md b/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md index e0dfe28020..af4ea4b563 100644 --- a/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md +++ b/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md @@ -324,4 +324,4 @@ This is the logmap repair filter. *Keywords: Log Map Repair Filter* --- -automatically generated on 2024-09-15 18:25 +automatically generated on 2024-09-15 18:28 From e728eef73c38c9e5fb2d541d003ad1f6f6ccea44 Mon Sep 17 00:00:00 2001 From: sven-h Date: Sun, 15 Sep 2024 19:15:33 +0000 Subject: [PATCH 3/6] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20dwsl?= =?UTF-8?q?ab/melt@403d3843bde41c67e6dbcc44c4919c9e1a79ed03=20=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .../external/http/MatcherHTTPCall.html | 37 ++++++++++++------- javadoc_latest/index-all.html | 2 + javadoc_latest/member-search-index.js | 2 +- 3 files changed, 26 insertions(+), 15 deletions(-) diff --git a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/external/http/MatcherHTTPCall.html b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/external/http/MatcherHTTPCall.html index cb144c77cc..71460ff4fa 100644 --- a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/external/http/MatcherHTTPCall.html +++ b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/external/http/MatcherHTTPCall.html @@ -174,7 +174,7 @@

Constructor Summary

Method Summary

-
+
Modifier and Type
@@ -218,17 +218,20 @@

Method Summary

void
setSleepTimeInSeconds(int sleepTimeInSeconds)
 
-
void
-
setTimeout(int timeout)
-
 
+
static void
+
setSSLValidation(boolean checkSSLCertificates)
+
 
void
-
setTimeout(int socketTimeout, +
setTimeout(int timeout)
+
 
+
void
+
setTimeout(int socketTimeout, int connectTimeout, int connectionRequestTimeout)
-
 
- -
 
+ + +
 
@@ -262,18 +265,18 @@

LOGGER

  • -
    -

    httpClient

    -
    private static org.apache.http.impl.client.CloseableHttpClient httpClient
    -
    -
  • -
  • CHECK_URL

    public static boolean CHECK_URL
  • +
    +

    httpClient

    +
    private static org.apache.http.impl.client.CloseableHttpClient httpClient
    +
    +
  • +
  • maxTrials

    private int maxTrials
    @@ -390,6 +393,12 @@

    MatcherHTTPCall

    Method Details

    • +
      +

      setSSLValidation

      +
      public static void setSSLValidation(boolean checkSSLCertificates)
      +
      +
    • +
    • match

      public URL match(URL source, diff --git a/javadoc_latest/index-all.html b/javadoc_latest/index-all.html index 7b76feee76..2520af8b0e 100644 --- a/javadoc_latest/index-all.html +++ b/javadoc_latest/index-all.html @@ -17369,6 +17369,8 @@

      S

      Deprecated.
       
      +
      setSSLValidation(boolean) - Static method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.http.MatcherHTTPCall
      +
       
      setStatementProcessor(Function<List<Statement>, List<Statement>>) - Method in class de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.util.textExtractors.TextExtractorRDFBase
       
      setStrategy(ImplementedBackgroundMatchingStrategies) - Method in class de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.external.matcher.BackgroundMatcher
      diff --git a/javadoc_latest/member-search-index.js b/javadoc_latest/member-search-index.js index ab0ec93e07..c97d86404e 100644 --- a/javadoc_latest/member-search-index.js +++ b/javadoc_latest/member-search-index.js @@ -1 +1 @@ -memberSearchIndex = [{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.external.services.stringOperations","c":"StringOperations.AbbreviationHandler","l":"AbbreviationHandler()","u":"%3Cinit%3E()"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.util","c":"SetSimilarity","l":"ABSOLUTE"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.filter.instance","c":"SimilarHierarchyFilterApproach","l":"ABSOLUTE_MATCHES"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_base.typetransformer","c":"AbstractTypeTransformer","l":"AbstractTypeTransformer(Class, 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=?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20dwsl?= =?UTF-8?q?ab/melt@403d3843bde41c67e6dbcc44c4919c9e1a79ed03=20=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .../generated_markdown/1_complete_list_of_matchers.md | 2 +- .../2_complete_list_of_matchers_multi_source.md | 2 +- .../generated_markdown/3_complete_list_of_filters.md | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md b/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md index f220212f4e..e044b31908 100644 --- a/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md +++ b/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md @@ -528,4 +528,4 @@ Better use MatcherYAAAPipeline because it can combine matchers which use differe *Keywords: MatcherYAAA Owl Api* --- -automatically generated on 2024-09-15 18:28 +automatically generated on 2024-09-15 19:16 diff --git a/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md b/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md index e7f9190e11..f93d6d1ba6 100644 --- a/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md +++ b/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md @@ -123,4 +123,4 @@ Matches multiple ontologies / knowledge graphs with an incremental merge approac *Keywords: Multi Source Dispatcher All Pairs* --- -automatically generated on 2024-09-15 18:28 +automatically generated on 2024-09-15 19:16 diff --git a/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md b/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md index af4ea4b563..1e7b40f348 100644 --- a/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md +++ b/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md @@ -324,4 +324,4 @@ This is the logmap repair filter. *Keywords: Log Map Repair Filter* --- -automatically generated on 2024-09-15 18:28 +automatically generated on 2024-09-15 19:16 From 88c96403655c487ce4ed83b33d1831501a7b8452 Mon Sep 17 00:00:00 2001 From: sven-h Date: Sat, 21 Sep 2024 08:41:04 +0000 Subject: [PATCH 5/6] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20dwsl?= =?UTF-8?q?ab/melt@4de88eea79a3a0ef6c13f62f7648a21294f228a6=20=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .../dws/melt/matching_base/IMatcher.html | 2 +- .../matching_base/class-use/IMatcher.html | 70 ++-- .../external/docker/MatcherDockerFile.html | 299 ++++++++++++++---- .../external/docker/package-tree.html | 2 +- .../dws/melt/matching_base/package-use.html | 6 +- javadoc_latest/index-all.html | 38 +++ javadoc_latest/member-search-index.js | 2 +- javadoc_latest/overview-tree.html | 2 +- 8 files changed, 335 insertions(+), 86 deletions(-) diff --git a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/IMatcher.html b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/IMatcher.html index 0720e9c22e..d58126a3d6 100644 --- a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/IMatcher.html +++ b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/IMatcher.html @@ -80,7 +80,7 @@

      Interface IMatcher<ModelClass,
      All Known Implementing Classes:
      -
      AddAlignmentExtensions, AddAlignmentMatcher, AdditionalConfidenceByFunction, AdditionalConfidenceFilter, AddNegativesRandomly, AddNegativesRandomlyAbsolute, AddNegativesRandomlyOneOneAssumption, AddNegativesRandomlyShare, AddNegativesViaAlignment, AddNegativesViaMatcher, AddPositivesWithReference, AlignmentSaveMatcher, AnonymousNodeFilter, BackgroundMatcher, BackgroundMatcherStandAlone, BadHostsFilter, BagOfWordsSetSimilarityFilter, BaseFilterWithSetComparison, BaselineStringMatcher, BoundedPathMatching, CardinalityFilter, CommonPropertiesFilter, ConfidenceCombiner, ConfidenceCurvatureFilter, ConfidenceFilter, Doc2vecModelMatcher, DocumentSimilarityBase, ExactStringMatcher, FileSaveMatcher, ForwardAlwaysMatcher, ForwardMatcher, HighPrecisionMatcher, HungarianExtractor, LLMBase, LLMBinaryFilter, LLMChooseGivenEntityFilter, LogMapRepairFilter, MachineLearningScikitFilter, MachineLearningWEKAFilter, MatchClassBasedOnInstances, MatcherCLI, MatcherCLIFromFile, MatcherHTTPCall, MatcherPipelineYAAAJena, MatcherPipelineYAAAJenaConstructor, MatcherPipelineYAAAOwlApi, MatcherYAAAJena, MatcherYAAAOwlApi, MatchPropBasedOnClass, MatchPropBasedOnInstances, MaxWeightBipartiteExtractor, MixedTypFilter, NaiveAscendingExtractor, NaiveDescendingExtractor, NtoMCorrespondenceFilter, OpenEAMatcher, ParisMatcher, ReferenceMatcher, ReflexiveCorrespondenceFilter, RelationTypeFineTuner, RelationTypePredictor, ScalableStringProcessingMatcher, ScaleAdditionalConfidence, ScaleConfidence, SentenceTransformersFineTuner, SentenceTransformersMatcher, SimilarHierarchyFilter, SimilarNeighboursFilter, SimilarTypeFilter, SimpleStringMatcher, StopwordExtraction, StringMatcher, SynonymTextMatcher, TopXFilter, TrainingAlignmentGenerator, TransformersBase, TransformersBaseFineTuner, TransformersFilter, TransformersFineTuner, TransformersFineTunerHpSearch, TypeFilter, UriInterfaceWrapper, VectorSpaceModelMatcher
      +
      AddAlignmentExtensions, AddAlignmentMatcher, AdditionalConfidenceByFunction, AdditionalConfidenceFilter, AddNegativesRandomly, AddNegativesRandomlyAbsolute, AddNegativesRandomlyOneOneAssumption, AddNegativesRandomlyShare, AddNegativesViaAlignment, AddNegativesViaMatcher, AddPositivesWithReference, AlignmentSaveMatcher, AnonymousNodeFilter, BackgroundMatcher, BackgroundMatcherStandAlone, BadHostsFilter, BagOfWordsSetSimilarityFilter, BaseFilterWithSetComparison, BaselineStringMatcher, BoundedPathMatching, CardinalityFilter, CommonPropertiesFilter, ConfidenceCombiner, ConfidenceCurvatureFilter, ConfidenceFilter, Doc2vecModelMatcher, DocumentSimilarityBase, ExactStringMatcher, FileSaveMatcher, ForwardAlwaysMatcher, ForwardMatcher, HighPrecisionMatcher, HungarianExtractor, LLMBase, LLMBinaryFilter, LLMChooseGivenEntityFilter, LogMapRepairFilter, MachineLearningScikitFilter, MachineLearningWEKAFilter, MatchClassBasedOnInstances, MatcherCLI, MatcherCLIFromFile, MatcherDockerFile, MatcherHTTPCall, MatcherPipelineYAAAJena, MatcherPipelineYAAAJenaConstructor, MatcherPipelineYAAAOwlApi, MatcherYAAAJena, MatcherYAAAOwlApi, MatchPropBasedOnClass, MatchPropBasedOnInstances, MaxWeightBipartiteExtractor, MixedTypFilter, NaiveAscendingExtractor, NaiveDescendingExtractor, NtoMCorrespondenceFilter, OpenEAMatcher, ParisMatcher, ReferenceMatcher, ReflexiveCorrespondenceFilter, RelationTypeFineTuner, RelationTypePredictor, ScalableStringProcessingMatcher, ScaleAdditionalConfidence, ScaleConfidence, SentenceTransformersFineTuner, SentenceTransformersMatcher, SimilarHierarchyFilter, SimilarNeighboursFilter, SimilarTypeFilter, SimpleStringMatcher, StopwordExtraction, StringMatcher, SynonymTextMatcher, TopXFilter, TrainingAlignmentGenerator, TransformersBase, TransformersBaseFineTuner, TransformersFilter, TransformersFineTuner, TransformersFineTunerHpSearch, TypeFilter, UriInterfaceWrapper, VectorSpaceModelMatcher

      public interface IMatcher<ModelClass,AlignmentClass,ParameterClass>
      diff --git a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/class-use/IMatcher.html b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/class-use/IMatcher.html index c2a0d22b78..91ba06c705 100644 --- a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/class-use/IMatcher.html +++ b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/class-use/IMatcher.html @@ -56,57 +56,59 @@

      Description
       
      - +
       
      - +
       
      - +
       
      - +
       
      - +
       
      - +
       
      - +
       
      - -
      + +
       
      + +
      This package contains preconfigured matcher content that can be used in matching pipelines or as an example/reference for a new background-based matcher.
      - -
       
      - -
      + +
       
      + +
      This package contains mapping extraction approaches as shown in Analyzing Mapping Extraction Approaches - C.
      - -
       
      - +
       
      - +
       
      - +
       
      - +
       
      - +
       
      - +
       
      - +
       
      - +
       
      - +
       
      - +
       
      - +
       
      + +
       
      + +
    • Uses of IMatcher in de.uni_mannheim.informatik.dws.melt.matching_base.external.http

      diff --git a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/external/docker/MatcherDockerFile.html b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/external/docker/MatcherDockerFile.html index d57117b391..41b8bfea5a 100644 --- a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/external/docker/MatcherDockerFile.html +++ b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/external/docker/MatcherDockerFile.html @@ -81,12 +81,12 @@

      Class MatcherDockerFile

      All Implemented Interfaces:
      -
      eu.sealsproject.platform.res.domain.omt.IOntologyMatchingToolBridge, eu.sealsproject.platform.res.tool.api.IPlugin, eu.sealsproject.platform.res.tool.api.IToolBridge, Closeable, AutoCloseable
      +
      IMatcher<URL,URL,URL>, eu.sealsproject.platform.res.domain.omt.IOntologyMatchingToolBridge, eu.sealsproject.platform.res.tool.api.IPlugin, eu.sealsproject.platform.res.tool.api.IToolBridge, Closeable, AutoCloseable

      public class MatcherDockerFile extends MatcherURL -implements Closeable
      +implements Closeable, IMatcher<URL,URL,URL>
    • This matcher creates a docker container based on a given docker image name. Within this container a matcher server should be started. Therefore it will use the MatcherHTTPCall internally to run the matcher. @@ -95,12 +95,12 @@

      Class MatcherDockerFile

      <dependency> <groupId>com.github.docker-java</groupId> <artifactId>docker-java-core</artifactId> - <version>3.2.7</version><!--maybe update version--> + <version>3.3.3</version><!--maybe update version--> </dependency> <dependency> <groupId>com.github.docker-java</groupId> <artifactId>docker-java-transport-httpclient5</artifactId> - <version>3.2.7</version><!--maybe update version--> + <version>3.3.3</version><!--maybe update version--> </dependency> With this in place everything should work.
      @@ -133,42 +133,48 @@

      Field Summary

      private com.github.dockerjava.api.DockerClient
       
      -
      private boolean
      - +
      private List<String>
      +
       
      -
      private int
      - +
      private boolean
      +
       
      -
      private String
      - +
      private int
      +
       
      -
      private int
      - +
      private String
      +
       
      -
      private static final boolean
      - +
      private int
      +
       
      - - -
      +
      private static final boolean
      + +
       
      + + +
      The callback for log entries.
      -
      private static final org.slf4j.Logger
      - -
       
      -
      private static final com.fasterxml.jackson.databind.ObjectMapper
      - +
      private static final org.slf4j.Logger
      +
       
      -
      private static final String
      - +
      private static final com.fasterxml.jackson.databind.ObjectMapper
      +
       
      -
      private boolean
      - -
      +
      private static final String
      + +
       
      +
      private boolean
      + +
      If true, the container binds only on localhost instead of all interfaces.
      -
      private int
      - +
      private int
      + +
       
      +
      private List<com.github.dockerjava.api.model.Bind>
      +
       
      @@ -221,6 +227,26 @@

      Method Summary

      Method
      Description
      void
      +
      addEnvironmentVariable(String environmentVariable)
      +
      +
      This method will add one environment variable in form of e.g.
      +
      +
      void
      + +
      +
      This method will add one environment variable where the key is "CUDA_VISIBLE_DEVICES".
      +
      +
      void
      +
      addVolumeMounted(com.github.dockerjava.api.model.Bind volume)
      +
      +
      Adds a volume mount specification represented by the corresponding object.
      +
      +
      void
      + +
      +
      Adds a volume mount specification represented as string e.g.
      +
      +
      void
       
      @@ -243,38 +269,48 @@

      Method Summary

      static com.github.dockerjava.core.DefaultDockerClientConfig.Builder
       
      -
      private int
      - + +
      -
      Returns a free port number on localhost.
      +
      Return the environment variables which are set for the container.
      -
      int
      - +
      private int
      +
      -
      The port on which the matching service is avilable.
      +
      Returns a free port number on localhost.
      - - +
      int
      +
      -
      Retunrs the image name which is used by this matcher.
      +
      The port on which the matching service is avilable.
      -
      static String
      - -
      -
      Extracts the image name from the docker file content.
      + + +
      +
      Retunrs the image name which is used by this matcher.
      static String
      - +
      +
      Extracts the image name from the docker file content.
      +
      +
      static String
      + +
      The naming convention of the MELT Web Docker files is such that the files carry the name of the image with an optional postfix of '-latest' such as 'my_image-latest.tar.gz'
      -
      int
      - -
       
      -
      private static org.apache.commons.compress.archivers.ArchiveInputStream
      - -
       
      +
      int
      + +
       
      +
      private static org.apache.commons.compress.archivers.ArchiveInputStream
      + +
       
      +
      List<com.github.dockerjava.api.model.Bind>
      + +
      +
      Return all mounted volumes as a list of Bind objects.
      +
      boolean
      @@ -312,6 +348,19 @@

      Method Summary

      Match two ontologies / knowledge graphs together and returns an alignment.
      + +
      match(URL source, + URL target, + URL inputAlignment, + URL parameters)
      +
      +
      Aligns two ontologies/knowledge graphs given as the first and second parameter.
      +
      +
      void
      +
      setEnvironmentVariables(List<String> environmentVariables)
      +
      +
      Set the environment variables which are used for the container.
      +
      void
      setInitialWaitingTimeInSeconds(int initialWaitingTimeInSeconds)
       
      @@ -322,15 +371,20 @@

      Method Summary

      Sets the timeouts for the HTTP call which happens when the docker container is started and the call to the service is executed.
      -
      private void
      - -
       
      +
      void
      +
      setVolumeMounted(List<com.github.dockerjava.api.model.Bind> volumeMounted)
      +
      +
      Set the list of bindings.
      +
      private void
      - +
       
      - - +
      private void
      +
       
      + + +
       
      @@ -438,6 +492,18 @@

      hostPort

    • +
      +

      volumeMounted

      +
      private List<com.github.dockerjava.api.model.Bind> volumeMounted
      +
      +
    • +
    • +
      +

      environmentVariables

      +
      private List<String> environmentVariables
      +
      +
    • +
    • freshInstance

      private boolean freshInstance
      @@ -603,6 +669,38 @@

      match

    • +
      +

      match

      +
      public URL match(URL source, + URL target, + URL inputAlignment, + URL parameters) + throws Exception
      +
      Description copied from interface: IMatcher
      +
      Aligns two ontologies/knowledge graphs given as the first and second parameter. + An additional input alignment can be given as well as parameters which further define how and what to match. + In case inputAlignment or parameters is not used, making them to the Object class, + will required no additional transformations of these objects (no overhead).
      +
      +
      Specified by:
      +
      match in interface IMatcher<URL,URL,URL>
      +
      Parameters:
      +
      source - this object represents the source ontology/knowledge graph
      +
      target - this object represents the target ontology/knowledge graph
      +
      inputAlignment - this object represents the input alignment.
      +
      parameters - object representing additional parameters. + Only add to this object and do not create a new Object like parameters= new ...() + because otherwise the parameters are lost (java ist call by value). + Sensible classes are Properties (preferred), Map<String, Object> or any similar data structure. + Some already specified keys (strings) can be found at ParameterConfigKeys.
      +
      Returns:
      +
      the resulting alignment of the matching process.
      +
      Throws:
      +
      Exception - any exception which occurs during matching
      +
      +
      +
    • +
    • getContainerPort

      private int getContainerPort()
      @@ -719,6 +817,97 @@

      isFreshInstance

    • +
      +

      getVolumeMounted

      +
      public List<com.github.dockerjava.api.model.Bind> getVolumeMounted()
      +
      Return all mounted volumes as a list of Bind objects.
      +
      +
      Returns:
      +
      a list of Bind objects.
      +
      +
      +
    • +
    • +
      +

      setVolumeMounted

      +
      public void setVolumeMounted(List<com.github.dockerjava.api.model.Bind> volumeMounted)
      +
      Set the list of bindings. This will override all previous bindings.
      +
      +
      Parameters:
      +
      volumeMounted - the list of bindings which should not be null.
      +
      +
      +
    • +
    • +
      +

      addVolumeMounted

      +
      public void addVolumeMounted(com.github.dockerjava.api.model.Bind volume)
      +
      Adds a volume mount specification represented by the corresponding object.
      +
      +
      Parameters:
      +
      volume - the corresponding bin object
      +
      +
      +
    • +
    • +
      +

      addVolumeMounted

      +
      public void addVolumeMounted(String volume)
      +
      Adds a volume mount specification represented as string e.g. /host:/container:ro.
      +
      +
      Parameters:
      +
      volume - the specification, e.g. /host:/container:ro
      +
      +
      +
    • +
    • +
      +

      getEnvironmentVariables

      +
      public List<String> getEnvironmentVariables()
      +
      Return the environment variables which are set for the container.
      +
      +
      Returns:
      +
      the environment variables which are set for the container.
      +
      +
      +
    • +
    • +
      +

      setEnvironmentVariables

      +
      public void setEnvironmentVariables(List<String> environmentVariables)
      +
      Set the environment variables which are used for the container. + This is a list of environemtn variables in form of e.g. "CUDA_VISIBLE_DEVICES=1"
      +
      +
      Parameters:
      +
      environmentVariables - a list of environemtn variables in form of e.g. "CUDA_VISIBLE_DEVICES=1"
      +
      +
      +
    • +
    • +
      +

      addEnvironmentVariable

      +
      public void addEnvironmentVariable(String environmentVariable)
      +
      This method will add one environment variable in form of e.g. "CUDA_VISIBLE_DEVICES=1".
      +
      +
      Parameters:
      +
      environmentVariable - one environment variable in form of e.g. "CUDA_VISIBLE_DEVICES=1".
      +
      +
      +
    • +
    • +
      +

      addEnvironmentVariableCudaVisibleDevices

      +
      public void addEnvironmentVariableCudaVisibleDevices(String visibleDevicesValue)
      +
      This method will add one environment variable where the key is "CUDA_VISIBLE_DEVICES". + The key does not need to be repreat. Just provide the value which can either be one number e.g. 2 (0-based) + or a list of numbers (gpus) like "1,2,3".
      +
      +
      Parameters:
      +
      visibleDevicesValue - provide the value which can either be one number e.g. 2 (0-based) or a list of numbers (gpus) like "1,2,3".
      +
      +
      +
    • +
    • toString

      public String toString()
      diff --git a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/external/docker/package-tree.html b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/external/docker/package-tree.html index ccef202916..3ec3f2f5cf 100644 --- a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/external/docker/package-tree.html +++ b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/external/docker/package-tree.html @@ -63,7 +63,7 @@

      Class Hierarchy

      • de.uni_mannheim.informatik.dws.melt.matching_base.MatcherURL (implements eu.sealsproject.platform.res.domain.omt.IOntologyMatchingToolBridge)
          -
        • de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile (implements java.io.Closeable)
        • +
        • de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile (implements java.io.Closeable, de.uni_mannheim.informatik.dws.melt.matching_base.IMatcher<ModelClass,AlignmentClass,ParameterClass>)
      diff --git a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/package-use.html b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/package-use.html index f49e4b0bae..34cdbd34c4 100644 --- a/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/package-use.html +++ b/javadoc_latest/de/uni_mannheim/informatik/dws/melt/matching_base/package-use.html @@ -182,8 +182,12 @@

      Class
      Description
      - +
      +
      Generic matcher interface which just implements one method called match.
      +
      + +
      RawMatcher which implements the minimal interface for being executed under the SEALS platform.
      diff --git a/javadoc_latest/index-all.html b/javadoc_latest/index-all.html index 2520af8b0e..baf45b6ba7 100644 --- a/javadoc_latest/index-all.html +++ b/javadoc_latest/index-all.html @@ -344,10 +344,18 @@

      A

       
      addElement(DcjsElement) - Method in class de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator.visualization.dashboard.DashboardBuilder
       
      +
      addEnvironmentVariable(String) - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile
      +
      +
      This method will add one environment variable in form of e.g.
      +
      addEnvironmentVariable(String, String) - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.cli.process.ExternalProcess
      Adds an environemtn varibale to the environment of the started process.
      +
      addEnvironmentVariableCudaVisibleDevices(String) - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile
      +
      +
      This method will add one environment variable where the key is "CUDA_VISIBLE_DEVICES".
      +
      addEnvironmentVariableFromCondaActivate(String) - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.cli.process.ExternalProcess
      When starting a python process within a conda virtual environment, it is usually necessary to run conda activate env-name.
      @@ -739,6 +747,14 @@

      A

      addTransformer(TypeTransformer<?, ?>) - Static method in class de.uni_mannheim.informatik.dws.melt.matching_base.typetransformer.TypeTransformerRegistry
       
      +
      addVolumeMounted(Bind) - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile
      +
      +
      Adds a volume mount specification represented by the corresponding object.
      +
      +
      addVolumeMounted(String) - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile
      +
      +
      Adds a volume mount specification represented as string e.g.
      +
      AGGREGATES_METHOD - Enum constant in enum de.uni_mannheim.informatik.dws.melt.yet_another_alignment_api.DefaultExtensions.OmvMetadata
      #Method denoting the aggregation of the result of several methods
      @@ -4037,6 +4053,8 @@

      E

      The variables in the environment which are used when starting an external process.
      +
      environmentVariables - Variable in class de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile
      +
       
      epochs - Variable in class de.uni_mannheim.informatik.dws.melt.matching_ml.python.Word2VecConfiguration
      The epochs to be used for the training.
      @@ -6137,6 +6155,10 @@

      G

      getEnumerationLabel(int) - Method in class de.uni_mannheim.informatik.dws.melt.matching_ml.python.nlptransformers.LLMChooseGivenEntityFilter
       
      +
      getEnvironmentVariables() - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile
      +
      +
      Return the environment variables which are set for the container.
      +
      getEpochs() - Method in class de.uni_mannheim.informatik.dws.melt.matching_ml.python.Word2VecConfiguration
       
      getErroneousReport() - Method in class de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator.metric.alignmentanalyzer.AlignmentAnalyzerResult
      @@ -8516,6 +8538,10 @@

      G

      Returns the full vocabulary of the specified model as HashSet (e.g.
      +
      getVolumeMounted() - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile
      +
      +
      Return all mounted volumes as a list of Bind objects.
      +
      getWeight() - Method in class de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.filter.extraction.MwbEdge
       
      getWelcomeMessage() - Static method in class de.uni_mannheim.informatik.dws.melt.matching_base.MeltUtil
      @@ -11961,6 +11987,8 @@

      M

       
      match(URL, URL, URL, URL) - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.cli.MatcherCLI
       
      +
      match(URL, URL, URL, URL) - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile
      +
       
      match(URL, URL, URL, URL) - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.http.MatcherHTTPCall
       
      match(List<Object>, Alignment, Object) - Method in class de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.multisource.clustering.FamerClustering
      @@ -16909,6 +16937,10 @@

      S

       
      setEntityTwo(String) - Method in class de.uni_mannheim.informatik.dws.melt.yet_another_alignment_api.Correspondence
       
      +
      setEnvironmentVariables(List<String>) - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile
      +
      +
      Set the environment variables which are used for the container.
      +
      setEpochs(int) - Method in class de.uni_mannheim.informatik.dws.melt.matching_ml.python.Word2VecConfiguration
       
      setEulerian(boolean) - Method in class de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.structurelevel.hierarchical.agony.AgonyEdge
      @@ -17536,6 +17568,10 @@

      S

       
      setVersion(String) - Method in class de.uni_mannheim.informatik.dws.melt.matching_assembly.SealsDescriptorHandler
       
      +
      setVolumeMounted(List<Bind>) - Method in class de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile
      +
      +
      Set the list of bindings.
      +
      setWindowSize(int) - Method in class de.uni_mannheim.informatik.dws.melt.matching_ml.python.Word2VecConfiguration
       
      setWithRepetitions(boolean) - Method in class de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.util.addnegatives.AddNegativesRandomly
      @@ -20681,6 +20717,8 @@

      V

      versionLine - Variable in class de.uni_mannheim.informatik.dws.melt.matching_base.external.seals.MatcherSeals.CheckJavaVersionConsumer
       
      +
      volumeMounted - Variable in class de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile
      +
       
      VOSClusteringTechnique - Class in de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.multisource.clustering
       
      VOSClusteringTechnique(Network, double) - Constructor for class de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.multisource.clustering.VOSClusteringTechnique
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source.dispatchers","c":"MultiSourceDispatcherIncrementalMergeByCluster","l":"setDistance(ClusterDistance)","u":"setDistance(de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.multisource.dispatchers.clustermerge.ClusterDistance)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.filter.extraction","c":"MwbNode","l":"setDistance(int)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_base.external.seals","c":"MatcherSealsBuilder","l":"setDoNotUseInputAlignment(boolean)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.elementlevel.scale","c":"ScalableStringProcessingMatcher","l":"setEarlyStopping(boolean)"},{"p":"de.uni_mannheim.informatik.dws.melt.yet_another_alignment_api","c":"Correspondence","l":"setEntityOne(String)","u":"setEntityOne(java.lang.String)"},{"p":"de.uni_mannheim.informatik.dws.melt.yet_another_alignment_api","c":"Correspondence","l":"setEntityTwo(String)","u":"setEntityTwo(java.lang.String)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_base.external.docker","c":"MatcherDockerFile","l":"setEnvironmentVariables(List)","u":"setEnvironmentVariables(java.util.List)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_ml.python","c":"Word2VecConfiguration","l":"setEpochs(int)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.structurelevel.hierarchical.agony","c":"AgonyEdge","l":"setEulerian(boolean)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.external.dbpedia","c":"DBpediaKnowledgeSource","l":"setExcludedHypernyms(Set)","u":"setExcludedHypernyms(java.util.Set)"},{"p":"de.uni_mannheim.informatik.dws.melt.yet_another_alignment_api","c":"Alignment","l":"setExtensions(Map)","u":"setExtensions(java.util.Map)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_assembly","c":"SealsExternalDescriptorHandler","l":"setExternalcommand(String)","u":"setExternalcommand(java.lang.String)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_owlapi_matchers","c":"AlcomoFilter","l":"setExtractionProblem(ExtractionProblem)","u":"setExtractionProblem(de.uni_mannheim.informatik.dws.alcomo.ExtractionProblem)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_ml.python.nlptransformers","c":"TransformersBase","l":"setExtractor(TextExtractor)","u":"setExtractor(de.uni_mannheim.informatik.dws.melt.matching_jena.TextExtractor)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_ml.python.nlptransformers","c":"TransformersBase","l":"setExtractorMap(TextExtractorMap)","u":"setExtractorMap(de.uni_mannheim.informatik.dws.melt.matching_jena.TextExtractorMap)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.filter","c":"TopXFilter","l":"setFilterMode(TopXFilter.TopFilterMode)","u":"setFilterMode(de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.filter.TopXFilter.TopFilterMode)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator.visualization.dashboard","c":"DcjsElement","l":"setFilterText(String)","u":"setFilterText(java.lang.String)"},{"p":"de.uni_mannheim.informatik.dws.melt.yet_another_alignment_api","c":"OntoInfo","l":"setFormalism(String)","u":"setFormalism(java.lang.String)"},{"p":"de.uni_mannheim.informatik.dws.melt.yet_another_alignment_api","c":"OntoInfo","l":"setFormalismURI(String)","u":"setFormalismURI(java.lang.String)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_base","c":"OaeiOptions","l":"setFormat(String)","u":"setFormat(java.lang.String)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.filter.extraction","c":"MwbNode","l":"setFree(boolean)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_base.external.seals","c":"MatcherSealsBuilder","l":"setFreshMatcherInstance(boolean)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_ml.python.nlptransformers","c":"LLMBase","l":"setGenerationArguments(TransformersArguments)","u":"setGenerationArguments(de.uni_mannheim.informatik.dws.melt.matching_ml.python.nlptransformers.TransformersArguments)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.multisource.dispatchers","c":"MultiSourceDispatcherIncrementalMerge","l":"setGoldStandard(Alignment, 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Writer)","u":"writeResourceText(org.apache.jena.util.iterator.ExtendedIterator,java.io.Writer)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator","c":"Evaluator","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator","c":"EvaluatorAlignmentAnalyzer","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator","c":"EvaluatorBasic","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator","c":"EvaluatorCopyResults","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator","c":"EvaluatorCSV","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator","c":"EvaluatorPipeline","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator","c":"EvaluatorRank","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator","c":"EvaluatorRankGroup","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator","c":"EvaluatorRelationTypePrediction","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator.significance","c":"EvaluatorMcNemarSignificance","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator.visualization.dashboard","c":"DashboardBuilder","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator.visualization.resultspage","c":"ResultsPageHTML","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator.visualization.resultspage","c":"ResultsPageLatex","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.multisource","c":"EvaluatorMultiSource","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.multisource","c":"EvaluatorMultiSourceBasic","l":"writeResultsToDirectory(File)","u":"writeResultsToDirectory(java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.evaluator.significance","c":"EvaluatorMcNemarSignificance","l":"writeResultsToDirectory(String)","u":"writeResultsToDirectory(java.lang.String)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.external.services.stringOperations","c":"StringOperations","l":"writeSetToFile(File, 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boolean)","u":"writeTrainingFile(org.apache.jena.ontology.OntModel,org.apache.jena.ontology.OntModel,de.uni_mannheim.informatik.dws.melt.yet_another_alignment_api.Alignment,java.io.File,boolean)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_ml.python.nlptransformers","c":"TransformersBaseFineTuner","l":"writeTrainingFile(OntModel, OntModel, Alignment, File, boolean)","u":"writeTrainingFile(org.apache.jena.ontology.OntModel,org.apache.jena.ontology.OntModel,de.uni_mannheim.informatik.dws.melt.yet_another_alignment_api.Alignment,java.io.File,boolean)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_ml.python.openea","c":"OpenEAMatcher","l":"writeTrainValAlignments(Alignment, File)","u":"writeTrainValAlignments(de.uni_mannheim.informatik.dws.melt.yet_another_alignment_api.Alignment,java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_ml.python.nlptransformers","c":"SentenceTransformersFineTuner","l":"writeTripletFormat(OntModel, OntModel, Alignment, File, boolean)","u":"writeTripletFormat(org.apache.jena.ontology.OntModel,org.apache.jena.ontology.OntModel,de.uni_mannheim.informatik.dws.melt.yet_another_alignment_api.Alignment,java.io.File,boolean)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_ml.python","c":"PythonServer","l":"writeVocabularyToFile(String, File)","u":"writeVocabularyToFile(java.lang.String,java.io.File)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_ml.python","c":"PythonServer","l":"writeVocabularyToFile(String, String)","u":"writeVocabularyToFile(java.lang.String,java.lang.String)"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.visualization","c":"LatexPrecisionRecall.PrecRecPoint","l":"x"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.filter","c":"TopXFilter","l":"x"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_jena_matchers.external.webIsAlod","c":"WebIsAlodSPARQLservice","l":"XL_CONFIDENCE"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_eval.visualization","c":"LatexPrecisionRecall.PrecRecPoint","l":"y"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_data","c":"TrackRepository.CommonKG","l":"YAGO_WIKIDATA_V1"},{"p":"de.uni_mannheim.informatik.dws.melt.matching_data","c":"TrackRepository.CommonKG","l":"YAGO_WIKIDATA_V1_SMALL"}];updateSearchResults(); \ No newline at end of file diff --git a/javadoc_latest/overview-tree.html b/javadoc_latest/overview-tree.html index 48944172c7..fd3b9bcb25 100644 --- a/javadoc_latest/overview-tree.html +++ b/javadoc_latest/overview-tree.html @@ -226,7 +226,7 @@

      Class Hierarchy

    • de.uni_mannheim.informatik.dws.melt.matching_base.MatcherCombination
    • -
    • de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile (implements java.io.Closeable)
    • +
    • de.uni_mannheim.informatik.dws.melt.matching_base.external.docker.MatcherDockerFile (implements java.io.Closeable, de.uni_mannheim.informatik.dws.melt.matching_base.IMatcher<ModelClass,AlignmentClass,ParameterClass>)
    • de.uni_mannheim.informatik.dws.melt.matching_base.MatcherFile
      • de.uni_mannheim.informatik.dws.melt.matching_base.external.seals.MatcherSeals
      • From 86026387cbf385f958e44dbab773b3509cb4d19f Mon Sep 17 00:00:00 2001 From: sven-h Date: Sat, 21 Sep 2024 08:48:32 +0000 Subject: [PATCH 6/6] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20dwsl?= =?UTF-8?q?ab/melt@4de88eea79a3a0ef6c13f62f7648a21294f228a6=20=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .../generated_markdown/1_complete_list_of_matchers.md | 6 +++--- .../2_complete_list_of_matchers_multi_source.md | 2 +- .../generated_markdown/3_complete_list_of_filters.md | 2 +- 3 files changed, 5 insertions(+), 5 deletions(-) diff --git a/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md b/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md index e044b31908..43d5d86115 100644 --- a/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md +++ b/4_available_matcher_components/generated_markdown/1_complete_list_of_matchers.md @@ -74,12 +74,12 @@ This matcher creates a docker container based on a given docker image name. com.github.docker-java docker-java-core - 3.2.7 + 3.3.3 com.github.docker-java docker-java-transport-httpclient5 - 3.2.7 + 3.3.3 ``` @@ -528,4 +528,4 @@ Better use MatcherYAAAPipeline because it can combine matchers which use differe *Keywords: MatcherYAAA Owl Api* --- -automatically generated on 2024-09-15 19:16 +automatically generated on 2024-09-21 08:42 diff --git a/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md b/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md index f93d6d1ba6..72fad48e44 100644 --- a/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md +++ b/4_available_matcher_components/generated_markdown/2_complete_list_of_matchers_multi_source.md @@ -123,4 +123,4 @@ Matches multiple ontologies / knowledge graphs with an incremental merge approac *Keywords: Multi Source Dispatcher All Pairs* --- -automatically generated on 2024-09-15 19:16 +automatically generated on 2024-09-21 08:42 diff --git a/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md b/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md index 1e7b40f348..e2be352140 100644 --- a/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md +++ b/4_available_matcher_components/generated_markdown/3_complete_list_of_filters.md @@ -324,4 +324,4 @@ This is the logmap repair filter. *Keywords: Log Map Repair Filter* --- -automatically generated on 2024-09-15 19:16 +automatically generated on 2024-09-21 08:42