pom.xml

<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
  xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
  <modelVersion>4.0.0</modelVersion>

  <groupId>SBMLme</groupId>
  <artifactId>SBMLme</artifactId>
  <version>0.0.6</version>
  <packaging>jar</packaging>

  <name>SBMLme</name>
  <url>http://maven.apache.org</url>

  <properties>
    <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
    <jdk.version>1.7</jdk.version>
  </properties>
<repositories>
  <repository>
    <id>JSBML-SNAPSHOT</id>
    <name>The JSBML Snapshot repository</name>
    <url>https://oss.sonatype.org/content/repositories/snapshots/</url>
  </repository>
</repositories>
  <dependencies>
    <dependency>
      <groupId>junit</groupId>
      <artifactId>junit</artifactId>
      <version>4.13.2</version>
      <scope>test</scope>
    </dependency>
    <dependency>
      <groupId>org.sbml.jsbml</groupId>
      <artifactId>jsbml</artifactId>
      <version>1.6.1</version>
    </dependency>
    <dependency>
    	<groupId>org.sbolstandard</groupId>
    	<artifactId>libSBOLj</artifactId>
    	<version>2.4.0</version>
    </dependency>
 	<dependency>
  		<groupId>com.fasterxml.jackson.core</groupId>
  		<artifactId>jackson-databind</artifactId>
  		<version>2.12.7.1</version>
		</dependency>
 	<dependency>
 		<groupId>de.uni-rostock.sbi</groupId>
 		<artifactId>CombineArchive</artifactId>
 		<version>1.3.6</version>
 	</dependency>
 	<dependency>
    	<groupId>de.binfalse</groupId>
    	<artifactId>BFLog</artifactId>
    	<version>1.3.7</version>
	</dependency>
    <dependency>
    	<groupId>commons-cli</groupId>
  		<artifactId>commons-cli</artifactId>
  		<version>1.5.0</version>
 	</dependency>
  </dependencies>
  <build>
  	<plugins>
      <!-- Set a JDK compiler level -->
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-compiler-plugin</artifactId>
        <version>3.10.1</version>
        <configuration>
          <source>${jdk.version}</source>
          <target>${jdk.version}</target>
        </configuration>
      </plugin>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-shade-plugin</artifactId>
        <version>3.4.1</version>
        <executions>
          <execution>
            <phase>package</phase>
            <goals>
              <goal>shade</goal>
            </goals>
            <configuration>
              <transformers>
                <transformer implementation="org.apache.maven.plugins.shade.resource.ManifestResourceTransformer">
                  <mainClass>sbmlme.converter.SBMLmeConverter</mainClass>
                </transformer>
              </transformers>
            </configuration>
          </execution>
        </executions>
      </plugin>
    </plugins>
  </build>
</project>