diff --git a/poetry.lock b/poetry.lock
index 0337dcc1a4..bc71016475 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,9 +1,10 @@
-# This file is automatically @generated by Poetry 1.5.1 and should not be changed by hand.
+# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand.
 
 [[package]]
 name = "apipkg"
 version = "3.0.2"
 description = "apipkg: namespace control and lazy-import mechanism"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -15,6 +16,7 @@ files = [
 name = "arrow"
 version = "1.2.3"
 description = "Better dates & times for Python"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -29,6 +31,7 @@ python-dateutil = ">=2.7.0"
 name = "async-timeout"
 version = "4.0.3"
 description = "Timeout context manager for asyncio programs"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -40,6 +43,7 @@ files = [
 name = "attrs"
 version = "23.1.0"
 description = "Classes Without Boilerplate"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -58,6 +62,7 @@ tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pyte
 name = "aws-requests-auth"
 version = "0.4.3"
 description = "AWS signature version 4 signing process for the python requests module"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -72,6 +77,7 @@ requests = ">=0.14.0"
 name = "awscli"
 version = "1.29.57"
 description = "Universal Command Line Environment for AWS."
+category = "main"
 optional = false
 python-versions = ">= 3.7"
 files = [
@@ -91,6 +97,7 @@ s3transfer = ">=0.7.0,<0.8.0"
 name = "beautifulsoup4"
 version = "4.12.2"
 description = "Screen-scraping library"
+category = "main"
 optional = false
 python-versions = ">=3.6.0"
 files = [
@@ -109,6 +116,7 @@ lxml = ["lxml"]
 name = "bitarray"
 version = "2.8.1"
 description = "efficient arrays of booleans -- C extension"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -220,6 +228,7 @@ files = [
 name = "boto3"
 version = "1.28.57"
 description = "The AWS SDK for Python"
+category = "main"
 optional = false
 python-versions = ">= 3.7"
 files = [
@@ -239,6 +248,7 @@ crt = ["botocore[crt] (>=1.21.0,<2.0a0)"]
 name = "boto3-stubs"
 version = "1.28.57"
 description = "Type annotations for boto3 1.28.57 generated with mypy-boto3-builder 7.19.0"
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -617,6 +627,7 @@ xray = ["mypy-boto3-xray (>=1.28.0,<1.29.0)"]
 name = "botocore"
 version = "1.31.57"
 description = "Low-level, data-driven core of boto 3."
+category = "main"
 optional = false
 python-versions = ">= 3.7"
 files = [
@@ -636,6 +647,7 @@ crt = ["awscrt (==0.16.26)"]
 name = "botocore-stubs"
 version = "1.31.56"
 description = "Type annotations and code completion for botocore"
+category = "dev"
 optional = false
 python-versions = ">=3.7,<4.0"
 files = [
@@ -651,6 +663,7 @@ typing-extensions = {version = ">=4.1.0", markers = "python_version < \"3.9\""}
 name = "certifi"
 version = "2023.7.22"
 description = "Python package for providing Mozilla's CA Bundle."
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -662,6 +675,7 @@ files = [
 name = "cffi"
 version = "1.16.0"
 description = "Foreign Function Interface for Python calling C code."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -726,6 +740,7 @@ pycparser = "*"
 name = "chardet"
 version = "3.0.4"
 description = "Universal encoding detector for Python 2 and 3"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -737,6 +752,7 @@ files = [
 name = "charset-normalizer"
 version = "3.2.0"
 description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
+category = "main"
 optional = false
 python-versions = ">=3.7.0"
 files = [
@@ -821,6 +837,7 @@ files = [
 name = "click"
 version = "8.1.7"
 description = "Composable command line interface toolkit"
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -835,6 +852,7 @@ colorama = {version = "*", markers = "platform_system == \"Windows\""}
 name = "codacy-coverage"
 version = "1.3.11"
 description = "Codacy coverage reporter for Python"
+category = "dev"
 optional = false
 python-versions = "*"
 files = [
@@ -853,6 +871,7 @@ test = ["coverage", "nosetests"]
 name = "codeguru-profiler-agent"
 version = "1.2.4"
 description = "The Python agent to be used for Amazon CodeGuru Profiler"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -867,6 +886,7 @@ boto3 = ">=1.14.0"
 name = "colorama"
 version = "0.3.3"
 description = "Cross-platform colored terminal text."
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -877,6 +897,7 @@ files = [
 name = "coverage"
 version = "6.5.0"
 description = "Code coverage measurement for Python"
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -942,6 +963,7 @@ toml = ["tomli"]
 name = "coveralls"
 version = "3.3.1"
 description = "Show coverage stats online via coveralls.io"
+category = "dev"
 optional = false
 python-versions = ">= 3.5"
 files = [
@@ -950,7 +972,7 @@ files = [
 ]
 
 [package.dependencies]
-coverage = ">=4.1,<6.0.dev0 || >6.1,<6.1.1 || >6.1.1,<7.0"
+coverage = ">=4.1,<6.0.0 || >6.1,<6.1.1 || >6.1.1,<7.0"
 docopt = ">=0.6.1"
 requests = ">=1.0.0"
 
@@ -961,6 +983,7 @@ yaml = ["PyYAML (>=3.10)"]
 name = "cryptography"
 version = "39.0.2"
 description = "cryptography is a package which provides cryptographic recipes and primitives to Python developers."
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -1006,6 +1029,7 @@ tox = ["tox"]
 name = "cycler"
 version = "0.11.0"
 description = "Composable style cycles"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -1017,6 +1041,7 @@ files = [
 name = "cython"
 version = "3.0.2"
 description = "The Cython compiler for writing C extensions in the Python language."
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
@@ -1082,26 +1107,31 @@ files = [
 
 [[package]]
 name = "dcicpyvcf"
-version = "1.0.0.1b0"
+version = "3.0.0"
 description = "Variant Call Format (VCF) parser for Python"
+category = "main"
 optional = false
-python-versions = "*"
+python-versions = ">=3.8.0,<3.12"
 files = [
-    {file = "dcicpyvcf-1.0.0.1b0.tar.gz", hash = "sha256:6303f63cd6c486ba826e7ea44428f39e00d8411ca97d46874ab9f68df8f45959"},
+    {file = "dcicpyvcf-3.0.0-py3-none-any.whl", hash = "sha256:2954a8e6b2b197b056d108409d166a18be261a18130c300c91a8bd73f9b880f7"},
+    {file = "dcicpyvcf-3.0.0.tar.gz", hash = "sha256:afda8c303d0ae06738e430ab8860a8a8fa873e3da0b26e8088bf0058f3a4898a"},
 ]
 
 [package.dependencies]
+cython = "*"
+pysam = ">=0.21.0"
 setuptools = "*"
 
 [[package]]
 name = "dcicsnovault"
-version = "10.0.4.1b25"
+version = "10.0.5.1b1"
 description = "Storage support for 4DN Data Portals."
+category = "main"
 optional = false
 python-versions = ">=3.8.1,<3.12"
 files = [
-    {file = "dcicsnovault-10.0.4.1b25-py3-none-any.whl", hash = "sha256:c89938c05f097f1e196b1d8ccf68b782cb6f80d65d1b988013ffb3a8dce42ff0"},
-    {file = "dcicsnovault-10.0.4.1b25.tar.gz", hash = "sha256:4ebba9b8d0b0e6a04295d0dc59469117cb01e3c309e235d81507048910e5d110"},
+    {file = "dcicsnovault-10.0.5.1b1-py3-none-any.whl", hash = "sha256:85785ea3c387b16060d9b4b37750bddb86b6312f00e30ebb2c4e344d6fcf2e2f"},
+    {file = "dcicsnovault-10.0.5.1b1.tar.gz", hash = "sha256:2ea151d151b88e8233f69938e4cd1d6415d6d715199bdeb04751d48888750207"},
 ]
 
 [package.dependencies]
@@ -1153,6 +1183,7 @@ xlrd = ">=1.0.0,<2.0.0"
 name = "dcicutils"
 version = "7.12.0.2b9"
 description = "Utility package for interacting with the 4DN Data Portal and other 4DN resources"
+category = "main"
 optional = false
 python-versions = ">=3.8,<3.12"
 files = [
@@ -1186,6 +1217,7 @@ webtest = ">=2.0.34,<3.0.0"
 name = "docker"
 version = "4.4.4"
 description = "A Python library for the Docker Engine API."
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -1207,6 +1239,7 @@ tls = ["cryptography (>=1.3.4)", "idna (>=2.0.0)", "pyOpenSSL (>=17.5.0)"]
 name = "docopt"
 version = "0.6.2"
 description = "Pythonic argument parser, that will make you smile"
+category = "dev"
 optional = false
 python-versions = "*"
 files = [
@@ -1217,6 +1250,7 @@ files = [
 name = "docutils"
 version = "0.16"
 description = "Docutils -- Python Documentation Utilities"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -1228,6 +1262,7 @@ files = [
 name = "elasticsearch"
 version = "7.13.4"
 description = "Python client for Elasticsearch"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4"
 files = [
@@ -1249,6 +1284,7 @@ requests = ["requests (>=2.4.0,<3.0.0)"]
 name = "elasticsearch-dsl"
 version = "7.4.1"
 description = "Python client for Elasticsearch"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
@@ -1268,6 +1304,7 @@ develop = ["coverage (<5.0.0)", "mock", "pytest (>=3.0.0)", "pytest-cov", "pytes
 name = "et-xmlfile"
 version = "1.1.0"
 description = "An implementation of lxml.xmlfile for the standard library"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -1279,6 +1316,7 @@ files = [
 name = "exceptiongroup"
 version = "1.1.3"
 description = "Backport of PEP 654 (exception groups)"
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1293,6 +1331,7 @@ test = ["pytest (>=6)"]
 name = "execnet"
 version = "1.4.1"
 description = "execnet: rapid multi-Python deployment"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1307,6 +1346,7 @@ apipkg = ">=1.4"
 name = "flake8"
 version = "6.1.0"
 description = "the modular source code checker: pep8 pyflakes and co"
+category = "dev"
 optional = false
 python-versions = ">=3.8.1"
 files = [
@@ -1323,6 +1363,7 @@ pyflakes = ">=3.1.0,<3.2.0"
 name = "flaky"
 version = "3.7.0"
 description = "Plugin for nose or pytest that automatically reruns flaky tests."
+category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
@@ -1334,6 +1375,7 @@ files = [
 name = "flask"
 version = "2.1.3"
 description = "A simple framework for building complex web applications."
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1356,6 +1398,7 @@ dotenv = ["python-dotenv"]
 name = "fqdn"
 version = "1.5.1"
 description = "Validates fully-qualified domain names against RFC 1123, so that they are acceptable to modern bowsers"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0, !=3.1, !=3.2, !=3.3, !=3.4, <4"
 files = [
@@ -1367,6 +1410,7 @@ files = [
 name = "future"
 version = "0.18.3"
 description = "Clean single-source support for Python 3 and 2"
+category = "main"
 optional = false
 python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 files = [
@@ -1377,6 +1421,7 @@ files = [
 name = "gitdb"
 version = "4.0.10"
 description = "Git Object Database"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1391,6 +1436,7 @@ smmap = ">=3.0.1,<6"
 name = "gitpython"
 version = "3.1.37"
 description = "GitPython is a Python library used to interact with Git repositories"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1408,6 +1454,7 @@ test = ["black", "coverage[toml]", "ddt (>=1.1.1,!=1.4.3)", "mypy", "pre-commit"
 name = "granite-suite"
 version = "0.1.11b0"
 description = "granite is a collection of software to call, filter and work with genomic variants"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -1427,6 +1474,7 @@ pytabix = ">=0.0.2"
 name = "greenlet"
 version = "2.0.2"
 description = "Lightweight in-process concurrent programming"
+category = "main"
 optional = false
 python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*"
 files = [
@@ -1435,6 +1483,7 @@ files = [
     {file = "greenlet-2.0.2-cp27-cp27m-win32.whl", hash = "sha256:6c3acb79b0bfd4fe733dff8bc62695283b57949ebcca05ae5c129eb606ff2d74"},
     {file = "greenlet-2.0.2-cp27-cp27m-win_amd64.whl", hash = "sha256:283737e0da3f08bd637b5ad058507e578dd462db259f7f6e4c5c365ba4ee9343"},
     {file = "greenlet-2.0.2-cp27-cp27mu-manylinux2010_x86_64.whl", hash = "sha256:d27ec7509b9c18b6d73f2f5ede2622441de812e7b1a80bbd446cb0633bd3d5ae"},
+    {file = "greenlet-2.0.2-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:d967650d3f56af314b72df7089d96cda1083a7fc2da05b375d2bc48c82ab3f3c"},
     {file = "greenlet-2.0.2-cp310-cp310-macosx_11_0_x86_64.whl", hash = "sha256:30bcf80dda7f15ac77ba5af2b961bdd9dbc77fd4ac6105cee85b0d0a5fcf74df"},
     {file = "greenlet-2.0.2-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:26fbfce90728d82bc9e6c38ea4d038cba20b7faf8a0ca53a9c07b67318d46088"},
     {file = "greenlet-2.0.2-cp310-cp310-manylinux_2_17_ppc64le.manylinux2014_ppc64le.whl", hash = "sha256:9190f09060ea4debddd24665d6804b995a9c122ef5917ab26e1566dcc712ceeb"},
@@ -1443,6 +1492,7 @@ files = [
     {file = "greenlet-2.0.2-cp310-cp310-musllinux_1_1_x86_64.whl", hash = "sha256:76ae285c8104046b3a7f06b42f29c7b73f77683df18c49ab5af7983994c2dd91"},
     {file = "greenlet-2.0.2-cp310-cp310-win_amd64.whl", hash = "sha256:2d4686f195e32d36b4d7cf2d166857dbd0ee9f3d20ae349b6bf8afc8485b3645"},
     {file = "greenlet-2.0.2-cp311-cp311-macosx_10_9_universal2.whl", hash = "sha256:c4302695ad8027363e96311df24ee28978162cdcdd2006476c43970b384a244c"},
+    {file = "greenlet-2.0.2-cp311-cp311-macosx_11_0_arm64.whl", hash = "sha256:d4606a527e30548153be1a9f155f4e283d109ffba663a15856089fb55f933e47"},
     {file = "greenlet-2.0.2-cp311-cp311-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:c48f54ef8e05f04d6eff74b8233f6063cb1ed960243eacc474ee73a2ea8573ca"},
     {file = "greenlet-2.0.2-cp311-cp311-manylinux_2_17_ppc64le.manylinux2014_ppc64le.whl", hash = "sha256:a1846f1b999e78e13837c93c778dcfc3365902cfb8d1bdb7dd73ead37059f0d0"},
     {file = "greenlet-2.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:3a06ad5312349fec0ab944664b01d26f8d1f05009566339ac6f63f56589bc1a2"},
@@ -1472,6 +1522,7 @@ files = [
     {file = "greenlet-2.0.2-cp37-cp37m-win32.whl", hash = "sha256:3f6ea9bd35eb450837a3d80e77b517ea5bc56b4647f5502cd28de13675ee12f7"},
     {file = "greenlet-2.0.2-cp37-cp37m-win_amd64.whl", hash = "sha256:7492e2b7bd7c9b9916388d9df23fa49d9b88ac0640db0a5b4ecc2b653bf451e3"},
     {file = "greenlet-2.0.2-cp38-cp38-macosx_10_15_x86_64.whl", hash = "sha256:b864ba53912b6c3ab6bcb2beb19f19edd01a6bfcbdfe1f37ddd1778abfe75a30"},
+    {file = "greenlet-2.0.2-cp38-cp38-macosx_11_0_arm64.whl", hash = "sha256:1087300cf9700bbf455b1b97e24db18f2f77b55302a68272c56209d5587c12d1"},
     {file = "greenlet-2.0.2-cp38-cp38-manylinux2010_x86_64.whl", hash = "sha256:ba2956617f1c42598a308a84c6cf021a90ff3862eddafd20c3333d50f0edb45b"},
     {file = "greenlet-2.0.2-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:fc3a569657468b6f3fb60587e48356fe512c1754ca05a564f11366ac9e306526"},
     {file = "greenlet-2.0.2-cp38-cp38-manylinux_2_17_ppc64le.manylinux2014_ppc64le.whl", hash = "sha256:8eab883b3b2a38cc1e050819ef06a7e6344d4a990d24d45bc6f2cf959045a45b"},
@@ -1480,6 +1531,7 @@ files = [
     {file = "greenlet-2.0.2-cp38-cp38-musllinux_1_1_x86_64.whl", hash = "sha256:b0ef99cdbe2b682b9ccbb964743a6aca37905fda5e0452e5ee239b1654d37f2a"},
     {file = "greenlet-2.0.2-cp38-cp38-win32.whl", hash = "sha256:b80f600eddddce72320dbbc8e3784d16bd3fb7b517e82476d8da921f27d4b249"},
     {file = "greenlet-2.0.2-cp38-cp38-win_amd64.whl", hash = "sha256:4d2e11331fc0c02b6e84b0d28ece3a36e0548ee1a1ce9ddde03752d9b79bba40"},
+    {file = "greenlet-2.0.2-cp39-cp39-macosx_11_0_arm64.whl", hash = "sha256:8512a0c38cfd4e66a858ddd1b17705587900dd760c6003998e9472b77b56d417"},
     {file = "greenlet-2.0.2-cp39-cp39-macosx_11_0_x86_64.whl", hash = "sha256:88d9ab96491d38a5ab7c56dd7a3cc37d83336ecc564e4e8816dbed12e5aaefc8"},
     {file = "greenlet-2.0.2-cp39-cp39-manylinux2010_x86_64.whl", hash = "sha256:561091a7be172ab497a3527602d467e2b3fbe75f9e783d8b8ce403fa414f71a6"},
     {file = "greenlet-2.0.2-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:971ce5e14dc5e73715755d0ca2975ac88cfdaefcaab078a284fea6cfabf866df"},
@@ -1500,6 +1552,7 @@ test = ["objgraph", "psutil"]
 name = "h5py"
 version = "3.9.0"
 description = "Read and write HDF5 files from Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1533,6 +1586,7 @@ numpy = ">=1.17.3"
 name = "html5lib"
 version = "1.1"
 description = "HTML parser based on the WHATWG HTML specification"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -1554,6 +1608,7 @@ lxml = ["lxml"]
 name = "humanfriendly"
 version = "1.44.9"
 description = "Human friendly output for text interfaces using Python"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1565,6 +1620,7 @@ files = [
 name = "hupper"
 version = "1.5"
 description = "Integrated process monitor for developing and reloading daemons."
+category = "main"
 optional = false
 python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*"
 files = [
@@ -1580,6 +1636,7 @@ testing = ["mock", "pytest", "pytest-cov", "watchdog"]
 name = "idna"
 version = "2.10"
 description = "Internationalized Domain Names in Applications (IDNA)"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
@@ -1591,6 +1648,7 @@ files = [
 name = "importlib-metadata"
 version = "6.8.0"
 description = "Read metadata from Python packages"
+category = "dev"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1610,6 +1668,7 @@ testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs
 name = "importlib-resources"
 version = "6.1.0"
 description = "Read resources from Python packages"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1628,6 +1687,7 @@ testing = ["pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)",
 name = "iniconfig"
 version = "2.0.0"
 description = "brain-dead simple config-ini parsing"
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1639,6 +1699,7 @@ files = [
 name = "isodate"
 version = "0.6.1"
 description = "An ISO 8601 date/time/duration parser and formatter"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1653,6 +1714,7 @@ six = "*"
 name = "isoduration"
 version = "20.11.0"
 description = "Operations with ISO 8601 durations"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1667,6 +1729,7 @@ arrow = ">=0.15.0"
 name = "itsdangerous"
 version = "2.1.2"
 description = "Safely pass data to untrusted environments and back."
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1678,6 +1741,7 @@ files = [
 name = "jinja2"
 version = "3.1.2"
 description = "A very fast and expressive template engine."
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1695,6 +1759,7 @@ i18n = ["Babel (>=2.7)"]
 name = "jmespath"
 version = "0.10.0"
 description = "JSON Matching Expressions"
+category = "main"
 optional = false
 python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 files = [
@@ -1706,6 +1771,7 @@ files = [
 name = "jsonpointer"
 version = "2.4"
 description = "Identify specific nodes in a JSON document (RFC 6901)"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*"
 files = [
@@ -1717,6 +1783,7 @@ files = [
 name = "jsonschema"
 version = "4.19.1"
 description = "An implementation of JSON Schema validation for Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1748,6 +1815,7 @@ format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-
 name = "jsonschema-specifications"
 version = "2023.7.1"
 description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1763,6 +1831,7 @@ referencing = ">=0.28.0"
 name = "kiwisolver"
 version = "1.4.5"
 description = "A fast implementation of the Cassowary constraint solver"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1876,6 +1945,7 @@ files = [
 name = "markupsafe"
 version = "2.1.3"
 description = "Safely add untrusted strings to HTML/XML markup."
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1899,6 +1969,16 @@ files = [
     {file = "MarkupSafe-2.1.3-cp311-cp311-musllinux_1_1_x86_64.whl", hash = "sha256:5bbe06f8eeafd38e5d0a4894ffec89378b6c6a625ff57e3028921f8ff59318ac"},
     {file = "MarkupSafe-2.1.3-cp311-cp311-win32.whl", hash = "sha256:dd15ff04ffd7e05ffcb7fe79f1b98041b8ea30ae9234aed2a9168b5797c3effb"},
     {file = "MarkupSafe-2.1.3-cp311-cp311-win_amd64.whl", hash = "sha256:134da1eca9ec0ae528110ccc9e48041e0828d79f24121a1a146161103c76e686"},
+    {file = "MarkupSafe-2.1.3-cp312-cp312-macosx_10_9_universal2.whl", hash = "sha256:f698de3fd0c4e6972b92290a45bd9b1536bffe8c6759c62471efaa8acb4c37bc"},
+    {file = "MarkupSafe-2.1.3-cp312-cp312-macosx_10_9_x86_64.whl", hash = "sha256:aa57bd9cf8ae831a362185ee444e15a93ecb2e344c8e52e4d721ea3ab6ef1823"},
+    {file = "MarkupSafe-2.1.3-cp312-cp312-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:ffcc3f7c66b5f5b7931a5aa68fc9cecc51e685ef90282f4a82f0f5e9b704ad11"},
+    {file = "MarkupSafe-2.1.3-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:47d4f1c5f80fc62fdd7777d0d40a2e9dda0a05883ab11374334f6c4de38adffd"},
+    {file = "MarkupSafe-2.1.3-cp312-cp312-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:1f67c7038d560d92149c060157d623c542173016c4babc0c1913cca0564b9939"},
+    {file = "MarkupSafe-2.1.3-cp312-cp312-musllinux_1_1_aarch64.whl", hash = "sha256:9aad3c1755095ce347e26488214ef77e0485a3c34a50c5a5e2471dff60b9dd9c"},
+    {file = "MarkupSafe-2.1.3-cp312-cp312-musllinux_1_1_i686.whl", hash = "sha256:14ff806850827afd6b07a5f32bd917fb7f45b046ba40c57abdb636674a8b559c"},
+    {file = "MarkupSafe-2.1.3-cp312-cp312-musllinux_1_1_x86_64.whl", hash = "sha256:8f9293864fe09b8149f0cc42ce56e3f0e54de883a9de90cd427f191c346eb2e1"},
+    {file = "MarkupSafe-2.1.3-cp312-cp312-win32.whl", hash = "sha256:715d3562f79d540f251b99ebd6d8baa547118974341db04f5ad06d5ea3eb8007"},
+    {file = "MarkupSafe-2.1.3-cp312-cp312-win_amd64.whl", hash = "sha256:1b8dd8c3fd14349433c79fa8abeb573a55fc0fdd769133baac1f5e07abf54aeb"},
     {file = "MarkupSafe-2.1.3-cp37-cp37m-macosx_10_9_x86_64.whl", hash = "sha256:8e254ae696c88d98da6555f5ace2279cf7cd5b3f52be2b5cf97feafe883b58d2"},
     {file = "MarkupSafe-2.1.3-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:cb0932dc158471523c9637e807d9bfb93e06a95cbf010f1a38b98623b929ef2b"},
     {file = "MarkupSafe-2.1.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:9402b03f1a1b4dc4c19845e5c749e3ab82d5078d16a2a4c2cd2df62d57bb0707"},
@@ -1935,6 +2015,7 @@ files = [
 name = "matplotlib"
 version = "3.3.4"
 description = "Python plotting package"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -1977,6 +2058,7 @@ python-dateutil = ">=2.1"
 name = "mccabe"
 version = "0.7.0"
 description = "McCabe checker, plugin for flake8"
+category = "dev"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -1988,6 +2070,7 @@ files = [
 name = "moto"
 version = "4.0.3"
 description = "A library that allows your python tests to easily mock out the boto library"
+category = "dev"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -2036,6 +2119,7 @@ xray = ["aws-xray-sdk (>=0.93,!=0.96)", "setuptools"]
 name = "negspy"
 version = "0.2.24"
 description = "Python NGS tools"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2046,6 +2130,7 @@ files = [
 name = "netaddr"
 version = "0.9.0"
 description = "A network address manipulation library for Python"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2057,6 +2142,7 @@ files = [
 name = "numpy"
 version = "1.24.4"
 description = "Fundamental package for array computing in Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2094,6 +2180,7 @@ files = [
 name = "openpyxl"
 version = "3.1.2"
 description = "A Python library to read/write Excel 2010 xlsx/xlsm files"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -2108,6 +2195,7 @@ et-xmlfile = "*"
 name = "opensearch-py"
 version = "2.3.1"
 description = "Python client for OpenSearch"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4"
 files = [
@@ -2132,6 +2220,7 @@ kerberos = ["requests-kerberos"]
 name = "packaging"
 version = "23.1"
 description = "Core utilities for Python packages"
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2143,6 +2232,7 @@ files = [
 name = "passlib"
 version = "1.7.4"
 description = "comprehensive password hashing framework supporting over 30 schemes"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2160,6 +2250,7 @@ totp = ["cryptography"]
 name = "pastedeploy"
 version = "1.5.2"
 description = "Load, configure, and compose WSGI applications and servers"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2174,6 +2265,7 @@ paste = ["Paste"]
 name = "pbkdf2"
 version = "1.3"
 description = "PKCS#5 v2.0 PBKDF2 Module"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2184,6 +2276,7 @@ files = [
 name = "pillow"
 version = "9.5.0"
 description = "Python Imaging Library (Fork)"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2263,6 +2356,7 @@ tests = ["check-manifest", "coverage", "defusedxml", "markdown2", "olefile", "pa
 name = "pip-licenses"
 version = "3.5.5"
 description = "Dump the software license list of Python packages installed with pip."
+category = "dev"
 optional = false
 python-versions = "~=3.7"
 files = [
@@ -2280,6 +2374,7 @@ test = ["docutils", "pytest-cov", "pytest-pycodestyle", "pytest-runner"]
 name = "pipdeptree"
 version = "2.13.0"
 description = "Command line utility to show dependency tree of packages."
+category = "dev"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2295,6 +2390,7 @@ test = ["covdefaults (>=2.3)", "diff-cover (>=7.7)", "pip (>=23.2)", "pytest (>=
 name = "pkgutil-resolve-name"
 version = "1.3.10"
 description = "Resolve a name to an object."
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -2306,6 +2402,7 @@ files = [
 name = "plaster"
 version = "1.0"
 description = "A loader interface around multiple config file formats."
+category = "main"
 optional = false
 python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*"
 files = [
@@ -2324,6 +2421,7 @@ testing = ["pytest", "pytest-cov"]
 name = "plaster-pastedeploy"
 version = "0.6"
 description = "A loader implementing the PasteDeploy syntax to be used by plaster."
+category = "main"
 optional = false
 python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*"
 files = [
@@ -2342,6 +2440,7 @@ testing = ["pytest", "pytest-cov"]
 name = "pluggy"
 version = "1.3.0"
 description = "plugin and hook calling mechanisms for python"
+category = "dev"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2357,6 +2456,7 @@ testing = ["pytest", "pytest-benchmark"]
 name = "psutil"
 version = "5.9.5"
 description = "Cross-platform lib for process and system monitoring in Python."
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
@@ -2383,6 +2483,7 @@ test = ["enum34", "ipaddress", "mock", "pywin32", "wmi"]
 name = "psycopg2"
 version = "2.9.8"
 description = "psycopg2 - Python-PostgreSQL Database Adapter"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -2403,6 +2504,7 @@ files = [
 name = "psycopg2-binary"
 version = "2.9.8"
 description = "psycopg2 - Python-PostgreSQL Database Adapter"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -2472,6 +2574,7 @@ files = [
 name = "ptable"
 version = "0.9.2"
 description = "A simple Python library for easily displaying tabular data in a visually appealing ASCII table format"
+category = "dev"
 optional = false
 python-versions = "*"
 files = [
@@ -2482,6 +2585,7 @@ files = [
 name = "py"
 version = "1.11.0"
 description = "library with cross-python path, ini-parsing, io, code, log facilities"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -2493,6 +2597,7 @@ files = [
 name = "pyasn1"
 version = "0.1.9"
 description = "ASN.1 types and codecs"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2504,6 +2609,7 @@ files = [
 name = "pybrowserid"
 version = "0.14.0"
 description = "Python library for the BrowserID Protocol"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2518,6 +2624,7 @@ requests = "*"
 name = "pycodestyle"
 version = "2.11.0"
 description = "Python style guide checker"
+category = "dev"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2529,6 +2636,7 @@ files = [
 name = "pycparser"
 version = "2.14"
 description = "C parser in Python"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2539,6 +2647,7 @@ files = [
 name = "pyflakes"
 version = "3.1.0"
 description = "passive checker of Python programs"
+category = "dev"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2550,6 +2659,7 @@ files = [
 name = "pyjwt"
 version = "2.8.0"
 description = "JSON Web Token implementation in Python"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2567,6 +2677,7 @@ tests = ["coverage[toml] (==5.0.4)", "pytest (>=6.0.0,<7.0.0)"]
 name = "pyopenssl"
 version = "23.2.0"
 description = "Python wrapper module around the OpenSSL library"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -2585,6 +2696,7 @@ test = ["flaky", "pretend", "pytest (>=3.0.1)"]
 name = "pyparsing"
 version = "3.1.1"
 description = "pyparsing module - Classes and methods to define and execute parsing grammars"
+category = "main"
 optional = false
 python-versions = ">=3.6.8"
 files = [
@@ -2599,6 +2711,7 @@ diagrams = ["jinja2", "railroad-diagrams"]
 name = "pyramid"
 version = "1.10.4"
 description = "The Pyramid Web Framework, a Pylons project"
+category = "main"
 optional = false
 python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*"
 files = [
@@ -2625,6 +2738,7 @@ testing = ["coverage", "nose", "virtualenv", "webtest (>=1.3.1)", "zope.componen
 name = "pyramid-multiauth"
 version = "0.9.0"
 description = "pyramid_multiauth"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2639,6 +2753,7 @@ pyramid = "*"
 name = "pyramid-retry"
 version = "1.0"
 description = "An execution policy for Pyramid that supports retrying requests after certain failure exceptions."
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2658,6 +2773,7 @@ testing = ["WebTest", "pytest", "pytest-cov"]
 name = "pyramid-tm"
 version = "2.5"
 description = "A package which allows Pyramid requests to join the active transaction"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2677,6 +2793,7 @@ testing = ["WebTest", "coverage (>=5.0)", "pytest", "pytest-cov"]
 name = "pyramid-translogger"
 version = "0.1"
 description = "access log logger tween (almost stolen from Paste.translogger)"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2690,6 +2807,7 @@ setuptools = "*"
 name = "pysam"
 version = "0.21.0"
 description = "pysam - a python module for reading, manipulating and writing genomic data sets."
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -2723,6 +2841,7 @@ cython = "*"
 name = "pytabix"
 version = "0.1"
 description = "Python interface for tabix"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2733,6 +2852,7 @@ files = [
 name = "pytest"
 version = "7.4.2"
 description = "pytest: simple powerful testing with Python"
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2755,6 +2875,7 @@ testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "no
 name = "pytest-cov"
 version = "4.1.0"
 description = "Pytest plugin for measuring coverage."
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2773,6 +2894,7 @@ testing = ["fields", "hunter", "process-tests", "pytest-xdist", "six", "virtuale
 name = "pytest-instafail"
 version = "0.5.0"
 description = "pytest plugin to show failures instantly"
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2787,6 +2909,7 @@ pytest = ">=5"
 name = "pytest-mock"
 version = "3.11.1"
 description = "Thin-wrapper around the mock package for easier use with pytest"
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2804,6 +2927,7 @@ dev = ["pre-commit", "pytest-asyncio", "tox"]
 name = "pytest-timeout"
 version = "2.1.0"
 description = "pytest plugin to abort hanging tests"
+category = "dev"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -2818,6 +2942,7 @@ pytest = ">=5.0.0"
 name = "pytest-xdist"
 version = "3.1.0"
 description = "pytest xdist plugin for distributed testing, most importantly across multiple CPUs"
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2838,6 +2963,7 @@ testing = ["filelock"]
 name = "python-dateutil"
 version = "2.8.2"
 description = "Extensions to the standard Python datetime module"
+category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
 files = [
@@ -2852,6 +2978,7 @@ six = ">=1.5"
 name = "python-magic"
 version = "0.4.27"
 description = "File type identification using libmagic"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -2863,6 +2990,7 @@ files = [
 name = "pytz"
 version = "2023.3.post1"
 description = "World timezone definitions, modern and historical"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2874,6 +3002,7 @@ files = [
 name = "pywin32"
 version = "227"
 description = "Python for Window Extensions"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2895,6 +3024,7 @@ files = [
 name = "pyyaml"
 version = "6.0.1"
 description = "YAML parser and emitter for Python"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -2903,6 +3033,7 @@ files = [
     {file = "PyYAML-6.0.1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:69b023b2b4daa7548bcfbd4aa3da05b3a74b772db9e23b982788168117739938"},
     {file = "PyYAML-6.0.1-cp310-cp310-manylinux_2_17_s390x.manylinux2014_s390x.whl", hash = "sha256:81e0b275a9ecc9c0c0c07b4b90ba548307583c125f54d5b6946cfee6360c733d"},
     {file = "PyYAML-6.0.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:ba336e390cd8e4d1739f42dfe9bb83a3cc2e80f567d8805e11b46f4a943f5515"},
+    {file = "PyYAML-6.0.1-cp310-cp310-musllinux_1_1_x86_64.whl", hash = "sha256:326c013efe8048858a6d312ddd31d56e468118ad4cdeda36c719bf5bb6192290"},
     {file = "PyYAML-6.0.1-cp310-cp310-win32.whl", hash = "sha256:bd4af7373a854424dabd882decdc5579653d7868b8fb26dc7d0e99f823aa5924"},
     {file = "PyYAML-6.0.1-cp310-cp310-win_amd64.whl", hash = "sha256:fd1592b3fdf65fff2ad0004b5e363300ef59ced41c2e6b3a99d4089fa8c5435d"},
     {file = "PyYAML-6.0.1-cp311-cp311-macosx_10_9_x86_64.whl", hash = "sha256:6965a7bc3cf88e5a1c3bd2e0b5c22f8d677dc88a455344035f03399034eb3007"},
@@ -2910,8 +3041,15 @@ files = [
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+    {file = "PyYAML-6.0.1-cp312-cp312-musllinux_1_1_x86_64.whl", hash = "sha256:8d4e9c88387b0f5c7d5f281e55304de64cf7f9c0021a3525bd3b1c542da3b0e4"},
+    {file = "PyYAML-6.0.1-cp312-cp312-win32.whl", hash = "sha256:d483d2cdf104e7c9fa60c544d92981f12ad66a457afae824d146093b8c294c54"},
+    {file = "PyYAML-6.0.1-cp312-cp312-win_amd64.whl", hash = "sha256:0d3304d8c0adc42be59c5f8a4d9e3d7379e6955ad754aa9d6ab7a398b59dd1df"},
     {file = "PyYAML-6.0.1-cp36-cp36m-macosx_10_9_x86_64.whl", hash = "sha256:50550eb667afee136e9a77d6dc71ae76a44df8b3e51e41b77f6de2932bfe0f47"},
     {file = "PyYAML-6.0.1-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:1fe35611261b29bd1de0070f0b2f47cb6ff71fa6595c077e42bd0c419fa27b98"},
     {file = "PyYAML-6.0.1-cp36-cp36m-manylinux_2_17_s390x.manylinux2014_s390x.whl", hash = "sha256:704219a11b772aea0d8ecd7058d0082713c3562b4e271b849ad7dc4a5c90c13c"},
@@ -2928,6 +3066,7 @@ files = [
     {file = "PyYAML-6.0.1-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:a0cd17c15d3bb3fa06978b4e8958dcdc6e0174ccea823003a106c7d4d7899ac5"},
     {file = "PyYAML-6.0.1-cp38-cp38-manylinux_2_17_s390x.manylinux2014_s390x.whl", hash = "sha256:28c119d996beec18c05208a8bd78cbe4007878c6dd15091efb73a30e90539696"},
     {file = "PyYAML-6.0.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:7e07cbde391ba96ab58e532ff4803f79c4129397514e1413a7dc761ccd755735"},
+    {file = "PyYAML-6.0.1-cp38-cp38-musllinux_1_1_x86_64.whl", hash = "sha256:49a183be227561de579b4a36efbb21b3eab9651dd81b1858589f796549873dd6"},
     {file = "PyYAML-6.0.1-cp38-cp38-win32.whl", hash = "sha256:184c5108a2aca3c5b3d3bf9395d50893a7ab82a38004c8f61c258d4428e80206"},
     {file = "PyYAML-6.0.1-cp38-cp38-win_amd64.whl", hash = "sha256:1e2722cc9fbb45d9b87631ac70924c11d3a401b2d7f410cc0e3bbf249f2dca62"},
     {file = "PyYAML-6.0.1-cp39-cp39-macosx_10_9_x86_64.whl", hash = "sha256:9eb6caa9a297fc2c2fb8862bc5370d0303ddba53ba97e71f08023b6cd73d16a8"},
@@ -2935,6 +3074,7 @@ files = [
     {file = "PyYAML-6.0.1-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:5773183b6446b2c99bb77e77595dd486303b4faab2b086e7b17bc6bef28865f6"},
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+    {file = "PyYAML-6.0.1-cp39-cp39-musllinux_1_1_x86_64.whl", hash = "sha256:04ac92ad1925b2cff1db0cfebffb6ffc43457495c9b3c39d3fcae417d7125dc5"},
     {file = "PyYAML-6.0.1-cp39-cp39-win32.whl", hash = "sha256:faca3bdcf85b2fc05d06ff3fbc1f83e1391b3e724afa3feba7d13eeab355484c"},
     {file = "PyYAML-6.0.1-cp39-cp39-win_amd64.whl", hash = "sha256:510c9deebc5c0225e8c96813043e62b680ba2f9c50a08d3724c7f28a747d1486"},
     {file = "PyYAML-6.0.1.tar.gz", hash = "sha256:bfdf460b1736c775f2ba9f6a92bca30bc2095067b8a9d77876d1fad6cc3b4a43"},
@@ -2944,6 +3084,7 @@ files = [
 name = "rdflib"
 version = "4.2.2"
 description = "RDFLib is a Python library for working with RDF, a simple yet powerful language for representing information."
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2963,6 +3104,7 @@ sparql = ["SPARQLWrapper"]
 name = "rdflib-jsonld"
 version = "0.6.0"
 description = "rdflib extension adding JSON-LD parser and serializer"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2977,6 +3119,7 @@ rdflib = "*"
 name = "redis"
 version = "4.6.0"
 description = "Python client for Redis database and key-value store"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2995,6 +3138,7 @@ ocsp = ["cryptography (>=36.0.1)", "pyopenssl (==20.0.1)", "requests (>=2.26.0)"
 name = "referencing"
 version = "0.30.2"
 description = "JSON Referencing + Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3010,6 +3154,7 @@ rpds-py = ">=0.7.0"
 name = "repoze-debug"
 version = "1.1"
 description = "Forensic debugging WSGI middleware"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3028,6 +3173,7 @@ testing = ["WebOb", "coverage", "nose"]
 name = "requests"
 version = "2.31.0"
 description = "Python HTTP for Humans."
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -3049,6 +3195,7 @@ use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"]
 name = "responses"
 version = "0.23.3"
 description = "A utility library for mocking out the `requests` Python library."
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -3069,6 +3216,7 @@ tests = ["coverage (>=6.0.0)", "flake8", "mypy", "pytest (>=7.0.0)", "pytest-asy
 name = "rfc3339-validator"
 version = "0.1.4"
 description = "A pure python RFC3339 validator"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -3083,6 +3231,7 @@ six = "*"
 name = "rfc3986"
 version = "1.5.0"
 description = "Validating URI References per RFC 3986"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3097,6 +3246,7 @@ idna2008 = ["idna"]
 name = "rfc3986-validator"
 version = "0.1.1"
 description = "Pure python rfc3986 validator"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -3108,6 +3258,7 @@ files = [
 name = "rpds-py"
 version = "0.10.3"
 description = "Python bindings to Rust's persistent data structures (rpds)"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3214,6 +3365,7 @@ files = [
 name = "rsa"
 version = "3.3"
 description = "Pure-Python RSA implementation"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3228,6 +3380,7 @@ pyasn1 = ">=0.1.3"
 name = "rutter"
 version = "0.4"
 description = "Py3k-compatible fork of Paste's urlmap"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3245,6 +3398,7 @@ testing = ["WebTest", "coverage", "pytest", "pytest-cov"]
 name = "s3transfer"
 version = "0.7.0"
 description = "An Amazon S3 Transfer Manager"
+category = "main"
 optional = false
 python-versions = ">= 3.7"
 files = [
@@ -3262,6 +3416,7 @@ crt = ["botocore[crt] (>=1.20.29,<2.0a.0)"]
 name = "sentry-sdk"
 version = "1.31.0"
 description = "Python client for Sentry (https://sentry.io)"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3307,6 +3462,7 @@ tornado = ["tornado (>=5)"]
 name = "setuptools"
 version = "68.2.2"
 description = "Easily download, build, install, upgrade, and uninstall Python packages"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3323,6 +3479,7 @@ testing-integration = ["build[virtualenv] (>=1.0.3)", "filelock (>=3.4.0)", "jar
 name = "simplejson"
 version = "3.19.1"
 description = "Simple, fast, extensible JSON encoder/decoder for Python"
+category = "main"
 optional = false
 python-versions = ">=2.5, !=3.0.*, !=3.1.*, !=3.2.*"
 files = [
@@ -3417,6 +3574,7 @@ files = [
 name = "six"
 version = "1.16.0"
 description = "Python 2 and 3 compatibility utilities"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
 files = [
@@ -3428,6 +3586,7 @@ files = [
 name = "smmap"
 version = "5.0.1"
 description = "A pure Python implementation of a sliding window memory map manager"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -3439,6 +3598,7 @@ files = [
 name = "soupsieve"
 version = "2.5"
 description = "A modern CSS selector implementation for Beautiful Soup."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3450,6 +3610,7 @@ files = [
 name = "sparqlwrapper"
 version = "1.8.5"
 description = "SPARQL Endpoint interface to Python"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3468,6 +3629,7 @@ keepalive = ["keepalive (>=0.5)"]
 name = "sqlalchemy"
 version = "1.4.41"
 description = "Database Abstraction Library"
+category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7"
 files = [
@@ -3515,7 +3677,7 @@ files = [
 ]
 
 [package.dependencies]
-greenlet = {version = "!=0.4.17", markers = "python_version >= \"3\" and (platform_machine == \"win32\" or platform_machine == \"WIN32\" or platform_machine == \"AMD64\" or platform_machine == \"amd64\" or platform_machine == \"x86_64\" or platform_machine == \"ppc64le\" or platform_machine == \"aarch64\")"}
+greenlet = {version = "!=0.4.17", markers = "python_version >= \"3\" and platform_machine == \"aarch64\" or python_version >= \"3\" and platform_machine == \"ppc64le\" or python_version >= \"3\" and platform_machine == \"x86_64\" or python_version >= \"3\" and platform_machine == \"amd64\" or python_version >= \"3\" and platform_machine == \"AMD64\" or python_version >= \"3\" and platform_machine == \"win32\" or python_version >= \"3\" and platform_machine == \"WIN32\""}
 
 [package.extras]
 aiomysql = ["aiomysql", "greenlet (!=0.4.17)"]
@@ -3542,6 +3704,7 @@ sqlcipher = ["sqlcipher3-binary"]
 name = "structlog"
 version = "19.2.0"
 description = "Structured Logging for Python"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3562,6 +3725,7 @@ tests = ["coverage", "freezegun (>=0.2.8)", "pretend", "pytest (>=3.3.0)", "pyth
 name = "subprocess-middleware"
 version = "0.3"
 description = "Subprocess WSGI middleware and Pyramid tween."
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3578,6 +3742,7 @@ test = ["WebTest", "pyramid", "pytest"]
 name = "supervisor"
 version = "4.2.5"
 description = "A system for controlling process state under UNIX"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3595,6 +3760,7 @@ testing = ["pytest", "pytest-cov"]
 name = "toml"
 version = "0.10.2"
 description = "Python Library for Tom's Obvious, Minimal Language"
+category = "main"
 optional = false
 python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 files = [
@@ -3606,6 +3772,7 @@ files = [
 name = "tomli"
 version = "2.0.1"
 description = "A lil' TOML parser"
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -3617,6 +3784,7 @@ files = [
 name = "tqdm"
 version = "4.66.1"
 description = "Fast, Extensible Progress Meter"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -3637,6 +3805,7 @@ telegram = ["requests"]
 name = "transaction"
 version = "3.1.0"
 description = "Transaction management for Python"
+category = "main"
 optional = false
 python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*"
 files = [
@@ -3656,6 +3825,7 @@ testing = ["coverage", "mock", "nose"]
 name = "translationstring"
 version = "1.3"
 description = "Utility library for i18n relied on by various Repoze and Pyramid packages"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3667,6 +3837,7 @@ files = [
 name = "types-awscrt"
 version = "0.19.1"
 description = "Type annotations and code completion for awscrt"
+category = "dev"
 optional = false
 python-versions = ">=3.7,<4.0"
 files = [
@@ -3678,6 +3849,7 @@ files = [
 name = "types-pyyaml"
 version = "6.0.12.12"
 description = "Typing stubs for PyYAML"
+category = "dev"
 optional = false
 python-versions = "*"
 files = [
@@ -3689,6 +3861,7 @@ files = [
 name = "types-s3transfer"
 version = "0.7.0"
 description = "Type annotations and code completion for s3transfer"
+category = "dev"
 optional = false
 python-versions = ">=3.7,<4.0"
 files = [
@@ -3700,6 +3873,7 @@ files = [
 name = "typing-extensions"
 version = "4.8.0"
 description = "Backported and Experimental Type Hints for Python 3.8+"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3711,6 +3885,7 @@ files = [
 name = "uptime"
 version = "3.0.1"
 description = "Cross-platform uptime library"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3721,6 +3896,7 @@ files = [
 name = "uri-template"
 version = "1.3.0"
 description = "RFC 6570 URI Template Processor"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -3735,6 +3911,7 @@ dev = ["flake8", "flake8-annotations", "flake8-bandit", "flake8-bugbear", "flake
 name = "urllib3"
 version = "1.26.16"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*"
 files = [
@@ -3751,6 +3928,7 @@ socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"]
 name = "venusian"
 version = "1.2.0"
 description = "A library for deferring decorator actions"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3766,6 +3944,7 @@ testing = ["coverage", "pytest", "pytest-cov"]
 name = "waitress"
 version = "2.1.2"
 description = "Waitress WSGI server"
+category = "main"
 optional = false
 python-versions = ">=3.7.0"
 files = [
@@ -3781,6 +3960,7 @@ testing = ["coverage (>=5.0)", "pytest", "pytest-cover"]
 name = "webcolors"
 version = "1.13"
 description = "A library for working with the color formats defined by HTML and CSS."
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -3796,6 +3976,7 @@ tests = ["pytest", "pytest-cov"]
 name = "webencodings"
 version = "0.5.1"
 description = "Character encoding aliases for legacy web content"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3807,6 +3988,7 @@ files = [
 name = "webob"
 version = "1.8.7"
 description = "WSGI request and response object"
+category = "main"
 optional = false
 python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*"
 files = [
@@ -3822,6 +4004,7 @@ testing = ["coverage", "pytest (>=3.1.0)", "pytest-cov", "pytest-xdist"]
 name = "websocket-client"
 version = "1.6.3"
 description = "WebSocket client for Python with low level API options"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3838,6 +4021,7 @@ test = ["websockets"]
 name = "webtest"
 version = "2.0.35"
 description = "Helper to test WSGI applications"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3859,6 +4043,7 @@ tests = ["PasteDeploy", "WSGIProxy2", "coverage", "mock", "nose (<1.3.0)", "pyqu
 name = "werkzeug"
 version = "2.1.2"
 description = "The comprehensive WSGI web application library."
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -3873,6 +4058,7 @@ watchdog = ["watchdog"]
 name = "wheel"
 version = "0.41.2"
 description = "A built-package format for Python"
+category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -3887,6 +4073,7 @@ test = ["pytest (>=6.0.0)", "setuptools (>=65)"]
 name = "wsgiproxy2"
 version = "0.4.2"
 description = "UNKNOWN"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3901,6 +4088,7 @@ webob = "*"
 name = "xlrd"
 version = "1.2.0"
 description = "Library for developers to extract data from Microsoft Excel (tm) spreadsheet files"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
@@ -3912,6 +4100,7 @@ files = [
 name = "xmltodict"
 version = "0.13.0"
 description = "Makes working with XML feel like you are working with JSON"
+category = "dev"
 optional = false
 python-versions = ">=3.4"
 files = [
@@ -3923,6 +4112,7 @@ files = [
 name = "zipp"
 version = "3.17.0"
 description = "Backport of pathlib-compatible object wrapper for zip files"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3938,6 +4128,7 @@ testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "p
 name = "zope-deprecation"
 version = "4.4.0"
 description = "Zope Deprecation Infrastructure"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3956,6 +4147,7 @@ test = ["zope.testrunner"]
 name = "zope-interface"
 version = "5.5.2"
 description = "Interfaces for Python"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -4009,6 +4201,7 @@ testing = ["coverage (>=5.0.3)", "zope.event", "zope.testing"]
 name = "zope-sqlalchemy"
 version = "1.6"
 description = "Minimal Zope/SQLAlchemy transaction integration"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -4028,4 +4221,4 @@ test = ["zope.testing"]
 [metadata]
 lock-version = "2.0"
 python-versions = ">=3.8.1,<3.12"
-content-hash = "c00e599361d8b19d9041b150b82641bce3216dbb13fa2ab70bbc74979820227f"
+content-hash = "0e2529574aaf98ad44d28b81e59b58dfd70e501ac076491934d2aa2c8fad0f24"
diff --git a/pyproject.toml b/pyproject.toml
index a40abcc8dc..d818395c2f 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -50,7 +50,7 @@ codeguru-profiler-agent = "^1.2.4"
 # of cryptography.hazmat.bindings._rust in cryptography package. 2023-04-21.
 cryptography = "39.0.2"
 colorama = "0.3.3"
-dcicpyvcf = "1.0.0.1b0"  # "^1.0.0"
+dcicpyvcf = "^3.0.0"
 dcicsnovault = "10.0.5.1b1"
 dcicutils = "7.12.0.2b9"
 elasticsearch = "7.13.4"