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= [ @@ -1336,7 +1301,6 @@ test = ["pytest (>=6)"] name = "execnet" version = "1.4.1" description = "execnet: rapid multi-Python deployment" -category = "main" optional = false python-versions = "*" files = [ @@ -1351,7 +1315,6 @@ apipkg = ">=1.4" name = "flake8" version = "6.1.0" description = "the modular source code checker: pep8 pyflakes and co" -category = "dev" optional = false python-versions = ">=3.8.1" files = [ @@ -1368,7 +1331,6 @@ pyflakes = ">=3.1.0,<3.2.0" name = "flaky" version = "3.7.0" description = "Plugin for nose or pytest that automatically reruns flaky tests." -category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" files = [ @@ -1380,7 +1342,6 @@ files = [ name = "flask" version = "2.1.3" description = "A simple framework for building complex web applications." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -1403,7 +1364,6 @@ dotenv = ["python-dotenv"] name = "fqdn" version = "1.5.1" description = "Validates fully-qualified domain names against RFC 1123, so that they are acceptable to modern bowsers" -category = "main" optional = false python-versions = ">=2.7, !=3.0, !=3.1, !=3.2, !=3.3, !=3.4, <4" files = [ @@ -1415,7 +1375,6 @@ files = [ name = "future" version = "0.18.3" description = "Clean single-source support for Python 3 and 2" -category = "main" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*" files = [ @@ -1426,7 +1385,6 @@ files = [ name = "gitdb" version = "4.0.10" description = "Git Object Database" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -1441,7 +1399,6 @@ smmap = ">=3.0.1,<6" name = "gitpython" version = "3.1.32" description = "GitPython is a Python library used to interact with Git repositories" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -1456,7 +1413,6 @@ gitdb = ">=4.0.1,<5" name = "granite-suite" version = "0.1.11b0" description = "granite is a collection of software to call, filter and work with genomic variants" -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -1476,7 +1432,6 @@ pytabix = ">=0.0.2" name = "greenlet" version = "2.0.2" description = "Lightweight in-process concurrent programming" -category = "main" optional = false python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*" files = [ @@ -1550,7 +1505,6 @@ test = ["objgraph", "psutil"] name = "h5py" version = "3.9.0" description = "Read and write HDF5 files from Python" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -1584,7 +1538,6 @@ numpy = ">=1.17.3" name = "html5lib" version = "1.1" description = "HTML parser based on the WHATWG HTML specification" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" files = [ @@ -1606,7 +1559,6 @@ lxml = ["lxml"] name = "humanfriendly" version = "1.44.9" description = "Human friendly output for text interfaces using Python" -category = "main" optional = false python-versions = "*" files = [ @@ -1618,7 +1570,6 @@ files = [ name = "hupper" version = "1.5" description = "Integrated process monitor for developing and reloading daemons." -category = "main" optional = false python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*" files = [ @@ -1634,7 +1585,6 @@ testing = ["mock", "pytest", "pytest-cov", "watchdog"] name = "idna" version = "2.10" description = "Internationalized Domain Names in Applications (IDNA)" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" files = [ @@ -1646,7 +1596,6 @@ files = [ name = "importlib-metadata" version = "6.8.0" description = "Read metadata from Python packages" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -1666,7 +1615,6 @@ testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs name = "importlib-resources" version = "6.0.1" description = "Read resources from Python packages" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -1685,7 +1633,6 @@ testing = ["pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", name = "iniconfig" version = "2.0.0" description = "brain-dead simple config-ini parsing" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -1697,7 +1644,6 @@ files = [ name = "isodate" version = "0.6.1" description = "An ISO 8601 date/time/duration parser and formatter" -category = "main" optional = false python-versions = "*" files = [ @@ -1712,7 +1658,6 @@ six = "*" name = "isoduration" version = "20.11.0" description = "Operations with ISO 8601 durations" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -1727,7 +1672,6 @@ arrow = ">=0.15.0" name = "itsdangerous" version = "2.1.2" description = "Safely pass data to untrusted environments and back." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -1739,7 +1683,6 @@ files = [ name = "jinja2" version = "3.1.2" description = "A very fast and expressive template engine." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -1757,7 +1700,6 @@ i18n = ["Babel (>=2.7)"] name = "jmespath" version = "0.10.0" description = "JSON Matching Expressions" -category = "main" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*" files = [ @@ -1769,7 +1711,6 @@ files = [ name = "jsonpointer" version = "2.4" description = "Identify specific nodes in a JSON document (RFC 6901)" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*" files = [ @@ -1781,7 +1722,6 @@ files = [ name = "jsonschema" version = "4.19.0" description = "An implementation of JSON Schema validation for Python" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -1813,7 +1753,6 @@ format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339- name = "jsonschema-specifications" version = "2023.7.1" description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -1829,7 +1768,6 @@ referencing = ">=0.28.0" name = "kiwisolver" version = "1.4.4" description = "A fast implementation of the Cassowary constraint solver" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -1907,7 +1845,6 @@ files = [ name = "markupsafe" version = "2.1.3" description = "Safely add untrusted strings to HTML/XML markup." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -1967,7 +1904,6 @@ files = [ name = "matplotlib" version = "3.3.4" description = "Python plotting package" -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -2010,7 +1946,6 @@ python-dateutil = ">=2.1" name = "mccabe" version = "0.7.0" description = "McCabe checker, plugin for flake8" -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -2022,7 +1957,6 @@ files = [ name = "moto" version = "4.0.3" description = "A library that allows your python tests to easily mock out the boto library" -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -2071,7 +2005,6 @@ xray = ["aws-xray-sdk (>=0.93,!=0.96)", "setuptools"] name = "negspy" version = "0.2.24" description = "Python NGS tools" -category = "main" optional = false python-versions = "*" files = [ @@ -2082,7 +2015,6 @@ files = [ name = "netaddr" version = "0.8.0" description = "A network address manipulation library for Python" -category = "main" optional = false python-versions = "*" files = [ @@ -2094,7 +2026,6 @@ files = [ name = "numpy" version = "1.24.4" description = "Fundamental package for array computing in Python" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -2132,7 +2063,6 @@ files = [ name = "openpyxl" version = "3.1.2" description = "A Python library to read/write Excel 2010 xlsx/xlsm files" -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -2147,7 +2077,6 @@ et-xmlfile = "*" name = "opensearch-py" version = "2.3.0" description = "Python client for OpenSearch" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4" files = [ @@ -2172,7 +2101,6 @@ kerberos = ["requests-kerberos"] name = "packaging" version = "23.1" description = "Core utilities for Python packages" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2184,7 +2112,6 @@ files = [ name = "passlib" version = "1.7.4" description = "comprehensive password hashing framework supporting over 30 schemes" -category = "main" optional = false python-versions = "*" files = [ @@ -2202,7 +2129,6 @@ totp = ["cryptography"] name = "pastedeploy" version = "1.5.2" description = "Load, configure, and compose WSGI applications and servers" -category = "main" optional = false python-versions = "*" files = [ @@ -2217,7 +2143,6 @@ paste = ["Paste"] name = "pbkdf2" version = "1.3" description = "PKCS#5 v2.0 PBKDF2 Module" -category = "main" optional = false python-versions = "*" files = [ @@ -2228,7 +2153,6 @@ files = [ name = "pillow" version = "9.5.0" description = "Python Imaging Library (Fork)" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -2308,7 +2232,6 @@ tests = ["check-manifest", "coverage", "defusedxml", "markdown2", "olefile", "pa name = "pip-licenses" version = "3.5.5" description = "Dump the software license list of Python packages installed with pip." -category = "dev" optional = false python-versions = "~=3.7" files = [ @@ -2326,7 +2249,6 @@ test = ["docutils", "pytest-cov", "pytest-pycodestyle", "pytest-runner"] name = "pipdeptree" version = "2.12.0" description = "Command line utility to show dependency tree of packages." -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -2342,7 +2264,6 @@ test = ["covdefaults (>=2.3)", "diff-cover (>=7.7)", "pip (>=23.2)", "pytest (>= name = "pkgutil-resolve-name" version = "1.3.10" description = "Resolve a name to an object." -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -2354,7 +2275,6 @@ files = [ name = "plaster" version = "1.0" description = "A loader interface around multiple config file formats." -category = "main" optional = false python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*" files = [ @@ -2373,7 +2293,6 @@ testing = ["pytest", "pytest-cov"] name = "plaster-pastedeploy" version = "0.6" description = "A loader implementing the PasteDeploy syntax to be used by plaster." -category = "main" optional = false python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*" files = [ @@ -2392,7 +2311,6 @@ testing = ["pytest", "pytest-cov"] name = "pluggy" version = "1.2.0" description = "plugin and hook calling mechanisms for python" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2408,7 +2326,6 @@ testing = ["pytest", "pytest-benchmark"] name = "psutil" version = "5.9.5" description = "Cross-platform lib for process and system monitoring in Python." -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" files = [ @@ -2435,7 +2352,6 @@ test = ["enum34", "ipaddress", "mock", "pywin32", "wmi"] name = "psycopg2" version = "2.9.7" description = "psycopg2 - Python-PostgreSQL Database Adapter" -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -2456,7 +2372,6 @@ files = [ name = "psycopg2-binary" version = "2.9.7" description = "psycopg2 - Python-PostgreSQL Database Adapter" -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -2526,7 +2441,6 @@ files = [ name = "ptable" version = "0.9.2" description = "A simple Python library for easily displaying tabular data in a visually appealing ASCII table format" -category = "dev" optional = false python-versions = "*" files = [ @@ -2537,7 +2451,6 @@ files = [ name = "py" version = "1.11.0" description = "library with cross-python path, ini-parsing, io, code, log facilities" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" files = [ @@ -2549,7 +2462,6 @@ files = [ name = "pyasn1" version = "0.1.9" description = "ASN.1 types and codecs" -category = "main" optional = false python-versions = "*" files = [ @@ -2561,7 +2473,6 @@ files = [ name = "pybrowserid" version = "0.14.0" description = "Python library for the BrowserID Protocol" -category = "main" optional = false python-versions = "*" files = [ @@ -2576,7 +2487,6 @@ requests = "*" name = "pycodestyle" version = "2.11.0" description = "Python style guide checker" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -2588,7 +2498,6 @@ files = [ name = "pycparser" version = "2.14" description = "C parser in Python" -category = "main" optional = false python-versions = "*" files = [ @@ -2599,7 +2508,6 @@ files = [ name = "pyflakes" version = "3.1.0" description = "passive checker of Python programs" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -2611,7 +2519,6 @@ files = [ name = "pyjwt" version = "2.8.0" description = "JSON Web Token implementation in Python" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -2629,7 +2536,6 @@ tests = ["coverage[toml] (==5.0.4)", "pytest (>=6.0.0,<7.0.0)"] name = "pyopenssl" version = "23.2.0" description = "Python wrapper module around the OpenSSL library" -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -2648,7 +2554,6 @@ test = ["flaky", "pretend", "pytest (>=3.0.1)"] name = "pyparsing" version = "3.1.1" description = "pyparsing module - Classes and methods to define and execute parsing grammars" -category = "main" optional = false python-versions = ">=3.6.8" files = [ @@ -2663,7 +2568,6 @@ diagrams = ["jinja2", "railroad-diagrams"] name = "pyramid" version = "1.10.4" description = "The Pyramid Web Framework, a Pylons project" -category = "main" optional = false python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*" files = [ @@ -2690,7 +2594,6 @@ testing = ["coverage", "nose", "virtualenv", "webtest (>=1.3.1)", "zope.componen name = "pyramid-multiauth" version = "0.9.0" description = "pyramid_multiauth" -category = "main" optional = false python-versions = "*" files = [ @@ -2705,7 +2608,6 @@ pyramid = "*" name = "pyramid-retry" version = "1.0" description = "An execution policy for Pyramid that supports retrying requests after certain failure exceptions." -category = "main" optional = false python-versions = "*" files = [ @@ -2725,7 +2627,6 @@ testing = ["WebTest", "pytest", "pytest-cov"] name = "pyramid-tm" version = "2.5" description = "A package which allows Pyramid requests to join the active transaction" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -2745,7 +2646,6 @@ testing = ["WebTest", "coverage (>=5.0)", "pytest", "pytest-cov"] name = "pyramid-translogger" version = "0.1" description = "access log logger tween (almost stolen from Paste.translogger)" -category = "main" optional = false python-versions = "*" files = [ @@ -2759,7 +2659,6 @@ setuptools = "*" name = "pysam" version = "0.21.0" description = "pysam - a python module for reading, manipulating and writing genomic data sets." -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -2793,7 +2692,6 @@ cython = "*" name = "pytabix" version = "0.1" description = "Python interface for tabix" -category = "main" optional = false python-versions = "*" files = [ @@ -2804,7 +2702,6 @@ files = [ name = "pytest" version = "7.4.0" description = "pytest: simple powerful testing with Python" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2827,7 +2724,6 @@ testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "no name = "pytest-cov" version = "4.1.0" description = "Pytest plugin for measuring coverage." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2846,7 +2742,6 @@ testing = ["fields", "hunter", "process-tests", "pytest-xdist", "six", "virtuale name = "pytest-instafail" version = "0.5.0" description = "pytest plugin to show failures instantly" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2861,7 +2756,6 @@ pytest = ">=5" name = "pytest-mock" version = "3.11.1" description = "Thin-wrapper around the mock package for easier use with pytest" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2879,7 +2773,6 @@ dev = ["pre-commit", "pytest-asyncio", "tox"] name = "pytest-timeout" version = "2.1.0" description = "pytest plugin to abort hanging tests" -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -2894,7 +2787,6 @@ pytest = ">=5.0.0" name = "pytest-xdist" version = "3.1.0" description = "pytest xdist plugin for distributed testing, most importantly across multiple CPUs" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2915,7 +2807,6 @@ testing = ["filelock"] name = "python-dateutil" version = "2.8.2" description = "Extensions to the standard Python datetime module" -category = "main" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7" files = [ @@ -2930,7 +2821,6 @@ six = ">=1.5" name = "python-magic" version = "0.4.27" description = "File type identification using libmagic" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" files = [ @@ -2942,7 +2832,6 @@ files = [ name = "pytz" version = "2023.3" description = "World timezone definitions, modern and historical" -category = "main" optional = false python-versions = "*" files = [ @@ -2954,7 +2843,6 @@ files = [ name = "pywin32" version = "227" description = "Python for Window Extensions" -category = "main" optional = false python-versions = "*" files = [ @@ -2976,7 +2864,6 @@ files = [ name = "pyyaml" version = "5.3.1" description = "YAML parser and emitter for Python" -category = "main" optional = false python-versions = "*" files = [ @@ -2999,7 +2886,6 @@ files = [ name = "rdflib" version = "4.2.2" description = "RDFLib is a Python library for working with RDF, a simple yet powerful language for representing information." -category = "main" optional = false python-versions = "*" files = [ @@ -3019,7 +2905,6 @@ sparql = ["SPARQLWrapper"] name = "rdflib-jsonld" version = "0.6.0" description = "rdflib extension adding JSON-LD parser and serializer" -category = "main" optional = false python-versions = "*" files = [ @@ -3034,7 +2919,6 @@ rdflib = "*" name = "redis" version = "4.6.0" description = "Python client for Redis database and key-value store" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -3053,7 +2937,6 @@ ocsp = ["cryptography (>=36.0.1)", "pyopenssl (==20.0.1)", "requests (>=2.26.0)" name = "referencing" version = "0.30.2" description = "JSON Referencing + Python" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -3069,7 +2952,6 @@ rpds-py = ">=0.7.0" name = "repoze-debug" version = "1.1" description = "Forensic debugging WSGI middleware" -category = "main" optional = false python-versions = "*" files = [ @@ -3088,7 +2970,6 @@ testing = ["WebOb", "coverage", "nose"] name = "requests" version = "2.31.0" description = "Python HTTP for Humans." -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -3110,7 +2991,6 @@ use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"] name = "responses" version = "0.23.3" description = "A utility library for mocking out the `requests` Python library." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -3131,7 +3011,6 @@ tests = ["coverage (>=6.0.0)", "flake8", "mypy", "pytest (>=7.0.0)", "pytest-asy name = "rfc3339-validator" version = "0.1.4" description = "A pure python RFC3339 validator" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" files = [ @@ -3146,7 +3025,6 @@ six = "*" name = "rfc3986" version = "1.5.0" description = "Validating URI References per RFC 3986" -category = "main" optional = false python-versions = "*" files = [ @@ -3161,7 +3039,6 @@ idna2008 = ["idna"] name = "rfc3986-validator" version = "0.1.1" description = "Pure python rfc3986 validator" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" files = [ @@ -3173,7 +3050,6 @@ files = [ name = "rpds-py" version = "0.9.2" description = "Python bindings to Rust's persistent data structures (rpds)" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -3280,7 +3156,6 @@ files = [ name = "rsa" version = "3.3" description = "Pure-Python RSA implementation" -category = "main" optional = false python-versions = "*" files = [ @@ -3295,7 +3170,6 @@ pyasn1 = ">=0.1.3" name = "rutter" version = "0.4" description = "Py3k-compatible fork of Paste's urlmap" -category = "main" optional = false python-versions = "*" files = [ @@ -3313,7 +3187,6 @@ testing = ["WebTest", "coverage", "pytest", "pytest-cov"] name = "s3transfer" version = "0.6.1" description = "An Amazon S3 Transfer Manager" -category = "main" optional = false python-versions = ">= 3.7" files = [ @@ -3331,7 +3204,6 @@ crt = ["botocore[crt] (>=1.20.29,<2.0a.0)"] name = "sentry-sdk" version = "1.29.2" description = "Python client for Sentry (https://sentry.io)" -category = "main" optional = false python-versions = "*" files = [ @@ -3374,7 +3246,6 @@ tornado = ["tornado (>=5)"] name = "setuptools" version = "68.0.0" description = "Easily download, build, install, upgrade, and uninstall Python packages" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -3391,7 +3262,6 @@ testing-integration = ["build[virtualenv]", "filelock (>=3.4.0)", "jaraco.envs ( name = "simplejson" version = "3.19.1" description = "Simple, fast, extensible JSON encoder/decoder for Python" -category = "main" optional = false python-versions = ">=2.5, !=3.0.*, !=3.1.*, !=3.2.*" files = [ @@ -3486,7 +3356,6 @@ files = [ name = "six" version = "1.16.0" description = "Python 2 and 3 compatibility utilities" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*" files = [ @@ -3498,7 +3367,6 @@ files = [ name = "smmap" version = "5.0.0" description = "A pure Python implementation of a sliding window memory map manager" -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -3510,7 +3378,6 @@ files = [ name = "soupsieve" version = "2.4.1" description = "A modern CSS selector implementation for Beautiful Soup." -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -3522,7 +3389,6 @@ files = [ name = "sparqlwrapper" version = "1.8.5" description = "SPARQL Endpoint interface to Python" -category = "main" optional = false python-versions = "*" files = [ @@ -3541,7 +3407,6 @@ keepalive = ["keepalive (>=0.5)"] name = "sqlalchemy" version = "1.4.41" description = "Database Abstraction Library" -category = "main" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7" files = [ @@ -3589,7 +3454,7 @@ files = [ ] [package.dependencies] -greenlet = {version = "!=0.4.17", markers = "python_version >= \"3\" and platform_machine == \"aarch64\" or python_version >= \"3\" and platform_machine == \"ppc64le\" or python_version >= \"3\" and platform_machine == \"x86_64\" or python_version >= \"3\" and platform_machine == \"amd64\" or python_version >= \"3\" and platform_machine == \"AMD64\" or python_version >= \"3\" and platform_machine == \"win32\" or python_version >= \"3\" and platform_machine == \"WIN32\""} +greenlet = {version = "!=0.4.17", markers = "python_version >= \"3\" and (platform_machine == \"win32\" or platform_machine == \"WIN32\" or platform_machine == \"AMD64\" or platform_machine == \"amd64\" or platform_machine == \"x86_64\" or platform_machine == \"ppc64le\" or platform_machine == \"aarch64\")"} [package.extras] aiomysql = ["aiomysql", "greenlet (!=0.4.17)"] @@ -3616,7 +3481,6 @@ sqlcipher = ["sqlcipher3-binary"] name = "structlog" version = "19.2.0" description = "Structured Logging for Python" -category = "main" optional = false python-versions = "*" files = [ @@ -3637,7 +3501,6 @@ tests = ["coverage", "freezegun (>=0.2.8)", "pretend", "pytest (>=3.3.0)", "pyth name = "subprocess-middleware" version = "0.3" description = "Subprocess WSGI middleware and Pyramid tween." -category = "main" optional = false python-versions = "*" files = [ @@ -3654,7 +3517,6 @@ test = ["WebTest", "pyramid", "pytest"] name = "supervisor" version = "4.2.5" description = "A system for controlling process state under UNIX" -category = "main" optional = false python-versions = "*" files = [ @@ -3672,7 +3534,6 @@ testing = ["pytest", "pytest-cov"] name = "toml" version = "0.10.2" description = "Python Library for Tom's Obvious, Minimal Language" -category = "main" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*" files = [ @@ -3684,7 +3545,6 @@ files = [ name = "tomli" version = "2.0.1" description = "A lil' TOML parser" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -3696,7 +3556,6 @@ files = [ name = "tqdm" version = "4.66.0" description = "Fast, Extensible Progress Meter" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -3717,7 +3576,6 @@ telegram = ["requests"] name = "transaction" version = "3.1.0" description = "Transaction management for Python" -category = "main" optional = false python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*" files = [ @@ -3737,7 +3595,6 @@ testing = ["coverage", "mock", "nose"] name = "translationstring" version = "1.3" description = "Utility library for i18n relied on by various Repoze and Pyramid packages" -category = "main" optional = false python-versions = "*" files = [ @@ -3749,7 +3606,6 @@ files = [ name = "types-awscrt" version = "0.17.0" description = "Type annotations and code completion for awscrt" -category = "dev" optional = false python-versions = ">=3.7,<4.0" files = [ @@ -3761,7 +3617,6 @@ files = [ name = "types-pyyaml" version = "6.0.12.11" description = "Typing stubs for PyYAML" -category = "dev" optional = false python-versions = "*" files = [ @@ -3773,7 +3628,6 @@ files = [ name = "types-s3transfer" version = "0.6.1" description = "Type annotations and code completion for s3transfer" -category = "dev" optional = false python-versions = ">=3.7,<4.0" files = [ @@ -3788,7 +3642,6 @@ types-awscrt = "*" name = "typing-extensions" version = "4.7.1" description = "Backported and Experimental Type Hints for Python 3.7+" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -3800,7 +3653,6 @@ files = [ name = "uptime" version = "3.0.1" description = "Cross-platform uptime library" -category = "main" optional = false python-versions = "*" files = [ @@ -3811,7 +3663,6 @@ files = [ name = "uri-template" version = "1.3.0" description = "RFC 6570 URI Template Processor" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -3826,7 +3677,6 @@ dev = ["flake8", "flake8-annotations", "flake8-bandit", "flake8-bugbear", "flake name = "urllib3" version = "1.26.16" description = "HTTP library with thread-safe connection pooling, file post, and more." -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*" files = [ @@ -3843,7 +3693,6 @@ socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"] name = "venusian" version = "1.2.0" description = "A library for deferring decorator actions" -category = "main" optional = false python-versions = "*" files = [ @@ -3859,7 +3708,6 @@ testing = ["coverage", "pytest", "pytest-cov"] name = "waitress" version = "2.1.2" description = "Waitress WSGI server" -category = "main" optional = false python-versions = ">=3.7.0" files = [ @@ -3875,7 +3723,6 @@ testing = ["coverage (>=5.0)", "pytest", "pytest-cover"] name = "webcolors" version = "1.13" description = "A library for working with the color formats defined by HTML and CSS." -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -3891,7 +3738,6 @@ tests = ["pytest", "pytest-cov"] name = "webencodings" version = "0.5.1" description = "Character encoding aliases for legacy web content" -category = "main" optional = false python-versions = "*" files = [ @@ -3903,7 +3749,6 @@ files = [ name = "webob" version = "1.8.7" description = "WSGI request and response object" -category = "main" optional = false python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*" files = [ @@ -3919,7 +3764,6 @@ testing = ["coverage", "pytest (>=3.1.0)", "pytest-cov", "pytest-xdist"] name = "websocket-client" version = "1.6.1" description = "WebSocket client for Python with low level API options" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -3936,7 +3780,6 @@ test = ["websockets"] name = "webtest" version = "2.0.35" description = "Helper to test WSGI applications" -category = "main" optional = false python-versions = "*" files = [ @@ -3958,7 +3801,6 @@ tests = ["PasteDeploy", "WSGIProxy2", "coverage", "mock", "nose (<1.3.0)", "pyqu name = "werkzeug" version = "2.1.2" description = "The comprehensive WSGI web application library." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -3973,7 +3815,6 @@ watchdog = ["watchdog"] name = "wheel" version = "0.41.1" description = "A built-package format for Python" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -3988,7 +3829,6 @@ test = ["pytest (>=6.0.0)", "setuptools (>=65)"] name = "wsgiproxy2" version = "0.4.2" description = "UNKNOWN" -category = "main" optional = false python-versions = "*" files = [ @@ -4003,7 +3843,6 @@ webob = "*" name = "xlrd" version = "1.2.0" description = "Library for developers to extract data from Microsoft Excel (tm) spreadsheet files" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" files = [ @@ -4015,7 +3854,6 @@ files = [ name = "xmltodict" version = "0.13.0" description = "Makes working with XML feel like you are working with JSON" -category = "dev" optional = false python-versions = ">=3.4" files = [ @@ -4027,7 +3865,6 @@ files = [ name = "zipp" version = "3.16.2" description = "Backport of pathlib-compatible object wrapper for zip files" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -4043,7 +3880,6 @@ testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "p name = "zope-deprecation" version = "4.4.0" description = "Zope Deprecation Infrastructure" -category = "main" optional = false python-versions = "*" files = [ @@ -4062,7 +3898,6 @@ test = ["zope.testrunner"] name = "zope-interface" version = "5.5.2" description = "Interfaces for Python" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" files = [ @@ -4116,7 +3951,6 @@ testing = ["coverage (>=5.0.3)", "zope.event", "zope.testing"] name = "zope-sqlalchemy" version = "1.6" description = "Minimal Zope/SQLAlchemy transaction integration" -category = "main" optional = false python-versions = "*" files = [ @@ -4136,4 +3970,4 @@ test = ["zope.testing"] [metadata] lock-version = "2.0" python-versions = ">=3.8.1,<3.10" -content-hash = "cbc358e65b7b5edfa5adc017d40aedb489dcfff4fa0efb9934283c4ff14ac740" +content-hash = "faa5b9ab8a2eebe765e03013b305b13a4a4b6d004ff657f5777775e7fb408a28" diff --git a/pyproject.toml b/pyproject.toml index 0fd52e7b0a..75b79f2e09 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -46,7 +46,7 @@ codeguru-profiler-agent = "^1.2.4" # At least on Mac M1 if cryptography package is later than 39.x.x (i.e. 40.x.x and up) # we get odd 'pyo3_runtime.PanicException: Python API call failed' error on import # of cryptography.hazmat.bindings._rust in cryptography package. 2023-04-21. -cryptography = "39.0.2" +cryptography = "41.0.3" colorama = "0.3.3" dcicpyvcf = "1.0.0.1b0" # "^1.0.0" dcicsnovault = "^10.0.2"