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re-process directory (probably just rerun with --overwrite)
annotate that a directory X
was processed already
should not be processed
given a DBIC dataset with .heudiconv/ report which Accession numbers were already processed (which subject/session)
for a given study ID, report which accessions were processed (and to where stored) and which weren't, and possibly run a conversion on those which weren't yet
(current ad-hoc line to execute is grep -B1 1018_model ~/heudiconv-ls001-20170227.txt | grep DICOM/ | sed -e 's,/001.*,,g' | xargs heudiconv -o ~/test-1018_model)
The text was updated successfully, but these errors were encountered:
so the WiP heudiconv_monitor already creates such a database. We should prepopulate it and make use of it also within heudiconv or our specific wrapper around (currently a shell script, bleh, at ~/bin/heudiconv) it to ignore/warning when some directory which was already processed ... we should store it in /inbox/BIDS/.heudiconv/statusdb.json or smth like that.
we probably want also to be able to be able to
--overwrite
).heudiconv/
report which Accession numbers were already processed (which subject/session)(current ad-hoc line to execute is
grep -B1 1018_model ~/heudiconv-ls001-20170227.txt | grep DICOM/ | sed -e 's,/001.*,,g' | xargs heudiconv -o ~/test-1018_model
)The text was updated successfully, but these errors were encountered: