Enviblenv.yml

name: iblenv
channels:
  - defaults
dependencies:
  - python=3.9
  - pip
  - pip:
   - apptools >=4.5.0
   - boto3
   - click
   - colorcet
   - colorlog
   - cython
   - dataclasses
   - datajoint
   - flake8
   - globus-sdk
   - graphviz
   - h5py
   - ibl-neuropixel
   - ibllib
   - iblutil
   - jupyter
   - jupyterlab
   - matplotlib
   - mtscomp
   - nbformat
   - numba
   - numpy
   - opencv-python # macOS 10.13 and prior are incompatible with modern versions of opencv
   - ONE-api
   - pandas
   - phylib
   - pillow
   - plotly
   - pyarrow
   - pyflakes >= 2.4.0
   - pynrrd
   - pyopengl
   - PyQt5==5.12.3
   - pyqtgraph
   - pytest
   - requests
   - scikits-bootstrap
   - scikit-learn
   - scipy >=1.4.1
   - seaborn
   - SimpleITK
   - soundfile
   - sphinx_gallery
   - statsmodels
   - tqdm
   - easyqc
    - pip
     - git+https://github.com/BrainCOGS/iblapps.git