Cherry-pick fixes to release 1.15 branch (#5241)

* Batch Iterator optimization (#5237) * Batch Opmization Signed-off-by: Alan Protasio <[email protected]> * Add test bacj Signed-off-by: Alan Protasio <[email protected]> * Testing Multiples scrape intervals Signed-off-by: Alan Protasio <[email protected]> * no assimption Signed-off-by: Alan Protasio <[email protected]> * Using max chunk ts Signed-off-by: Alan Protasio <[email protected]> * test with scrape 10 Signed-off-by: Alan Protasio <[email protected]> * rename method Signed-off-by: Alan Protasio <[email protected]> * comments Signed-off-by: Alan Protasio <[email protected]> * using next Signed-off-by: Alan Protasio <[email protected]> * change test name Signed-off-by: Alan Protasio <[email protected]> * changelog/comments Signed-off-by: Alan Protasio <[email protected]> --------- Signed-off-by: Alan Protasio <[email protected]> Signed-off-by: Ben Ye <[email protected]> * Store Gateway: Convert metrics from summary to histograms (#5239) * Convert following metrics from summary to histogram cortex_bucket_store_series_blocks_queried cortex_bucket_store_series_data_fetched cortex_bucket_store_series_data_size_touched_bytes cortex_bucket_store_series_data_size_fetched_bytes cortex_bucket_store_series_data_touched cortex_bucket_store_series_result_series Signed-off-by: Friedrich Gonzalez <[email protected]> * Update changelog Signed-off-by: Friedrich Gonzalez <[email protected]> * fix changelog Signed-off-by: Friedrich Gonzalez <[email protected]> --------- Signed-off-by: Friedrich Gonzalez <[email protected]> Signed-off-by: Ben Ye <[email protected]> * update changelog Signed-off-by: Ben Ye <[email protected]> * Catch context error in the s3 bucket client (#5240) Signed-off-by: Xiaochao Dong (@damnever) <[email protected]> Signed-off-by: Ben Ye <[email protected]> * bump RC version Signed-off-by: Ben Ye <[email protected]> --------- Signed-off-by: Alan Protasio <[email protected]> Signed-off-by: Ben Ye <[email protected]> Signed-off-by: Friedrich Gonzalez <[email protected]> Signed-off-by: Xiaochao Dong (@damnever) <[email protected]> Co-authored-by: Alan Protasio <[email protected]> Co-authored-by: Friedrich Gonzalez <[email protected]> Co-authored-by: Xiaochao Dong <[email protected]>
cortexproject · Apr 1, 2023 · af49d70 · af49d70
1 parent ebb1835
commit af49d70
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -11,6 +11,7 @@
 * [CHANGE] Tracing: Use the default OTEL trace sampler when `-tracing.otel.exporter-type` is set to `awsxray`. #5141
 * [CHANGE] Ingester partial error log line to debug level. #5192
 * [CHANGE] Change HTTP status code from 503/422 to 499 if a request is canceled. #5220
+* [CHANGE] Store gateways summary metrics have been converted to histograms `cortex_bucket_store_series_blocks_queried`, `cortex_bucket_store_series_data_fetched`, `cortex_bucket_store_series_data_size_touched_bytes`, `cortex_bucket_store_series_data_size_fetched_bytes`, `cortex_bucket_store_series_data_touched`, `cortex_bucket_store_series_result_series` #5239
 * [FEATURE] Querier/Query Frontend: support Prometheus /api/v1/status/buildinfo API. #4978
 * [FEATURE] Ingester: Add active series to all_user_stats page. #4972
 * [FEATURE] Ingester: Added `-blocks-storage.tsdb.head-chunks-write-queue-size` allowing to configure the size of the in-memory queue used before flushing chunks to the disk . #5000
@@ -44,6 +45,7 @@
 * [ENHANCEMENT] Distributor: Reuse byte slices when serializing requests from distributors to ingesters. #5193
 * [ENHANCEMENT] Query Frontend: Add number of chunks and samples fetched in query stats. #5198
 * [ENHANCEMENT] Implement grpc.Compressor.DecompressedSize for snappy to optimize memory allocations. #5213
+* [ENHANCEMENT] Querier: Batch Iterator optimization to prevent transversing it multiple times query ranges steps does not overlap. #5237
 * [BUGFIX] Updated `golang.org/x/net` dependency to fix CVE-2022-27664. #5008
 * [BUGFIX] Fix panic when otel and xray tracing is enabled. #5044
 * [BUGFIX] Fixed no compact block got grouped in shuffle sharding grouper. #5055
@@ -57,6 +59,7 @@
 * [BUGFIX] Compactor: Fix issue that shuffle sharding planner return error if block is under visit by other compactor. #5188
 * [BUGFIX] Fix S3 BucketWithRetries upload empty content issue #5217
 * [BUGFIX] Query Frontend: Disable `absent`, `absent_over_time` and `scalar` for vertical sharding. #5221
+* [BUGFIX] Catch context error in the s3 bucket client. #5240
 
 ## 1.14.0 2022-12-02
 

diff --git a/VERSION b/VERSION
@@ -1 +1 @@
-1.15.0-rc.0
+1.15.0-rc.1
diff --git a/pkg/querier/batch/batch.go b/pkg/querier/batch/batch.go
@@ -43,6 +43,9 @@ type iterator interface {
 	// Seek or Next have returned true.
 	AtTime() int64
 
+	// MaxCurrentChunkTime returns the max time on the current chunk.
+	MaxCurrentChunkTime() int64
+
 	// Batch returns the current batch.  Must only be called after Seek or Next
 	// have returned true.
 	Batch() promchunk.Batch
@@ -98,6 +101,17 @@ func (a *iteratorAdapter) Seek(t int64) bool {
 				a.curr.Index++
 			}
 			return true
+		} else if t <= a.underlying.MaxCurrentChunkTime() {
+			// In this case, some timestamp inside the current underlying chunk can fulfill the seek.
+			// In this case we will call next until we find the sample as it will be faster than calling
+			// `a.underlying.Seek` directly as this would cause the iterator to start from the beginning of the chunk.
+			// See: https://github.com/cortexproject/cortex/blob/f69452975877c67ac307709e5f60b8d20477764c/pkg/querier/batch/chunk.go#L26-L45
+			//      https://github.com/cortexproject/cortex/blob/f69452975877c67ac307709e5f60b8d20477764c/pkg/chunk/encoding/prometheus_chunk.go#L90-L95
+			for a.Next() {
+				if t <= a.curr.Timestamps[a.curr.Index] {
+					return true
+				}
+			}
 		}
 	}
 

diff --git a/pkg/querier/batch/batch_test.go b/pkg/querier/batch/batch_test.go
@@ -35,7 +35,7 @@ func BenchmarkNewChunkMergeIterator_CreateAndIterate(b *testing.B) {
 			scenario.duplicationFactor,
 			scenario.enc.String())
 
-		chunks := createChunks(b, scenario.numChunks, scenario.numSamplesPerChunk, scenario.duplicationFactor, scenario.enc)
+		chunks := createChunks(b, step, scenario.numChunks, scenario.numSamplesPerChunk, scenario.duplicationFactor, scenario.enc)
 
 		b.Run(name, func(b *testing.B) {
 			b.ReportAllocs()
@@ -55,10 +55,59 @@ func BenchmarkNewChunkMergeIterator_CreateAndIterate(b *testing.B) {
 	}
 }
 
+func BenchmarkNewChunkMergeIterator_Seek(b *testing.B) {
+	scenarios := []struct {
+		numChunks          int
+		numSamplesPerChunk int
+		duplicationFactor  int
+		seekStep           time.Duration
+		scrapeInterval     time.Duration
+		enc                promchunk.Encoding
+	}{
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 30 * time.Second, seekStep: 30 * time.Second / 2, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 30 * time.Second, seekStep: 30 * time.Second, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 30 * time.Second, seekStep: 30 * time.Second * 2, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 30 * time.Second, seekStep: 30 * time.Second * 10, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 30 * time.Second, seekStep: 30 * time.Second * 30, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 30 * time.Second, seekStep: 30 * time.Second * 50, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 30 * time.Second, seekStep: 30 * time.Second * 100, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 30 * time.Second, seekStep: 30 * time.Second * 200, enc: promchunk.PrometheusXorChunk},
+
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 10 * time.Second, seekStep: 10 * time.Second / 2, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 10 * time.Second, seekStep: 10 * time.Second, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 10 * time.Second, seekStep: 10 * time.Second * 2, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 10 * time.Second, seekStep: 10 * time.Second * 10, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 10 * time.Second, seekStep: 10 * time.Second * 30, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 10 * time.Second, seekStep: 10 * time.Second * 50, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 10 * time.Second, seekStep: 10 * time.Second * 100, enc: promchunk.PrometheusXorChunk},
+		{numChunks: 1000, numSamplesPerChunk: 120, duplicationFactor: 3, scrapeInterval: 10 * time.Second, seekStep: 10 * time.Second * 200, enc: promchunk.PrometheusXorChunk},
+	}
+
+	for _, scenario := range scenarios {
+		name := fmt.Sprintf("scrapeInterval %vs seekStep: %vs",
+			scenario.scrapeInterval.Seconds(),
+			scenario.seekStep.Seconds())
+
+		chunks := createChunks(b, scenario.scrapeInterval, scenario.numChunks, scenario.numSamplesPerChunk, scenario.duplicationFactor, scenario.enc)
+
+		b.Run(name, func(b *testing.B) {
+			b.ReportAllocs()
+
+			for n := 0; n < b.N; n++ {
+				it := NewChunkMergeIterator(chunks, 0, 0)
+				i := int64(0)
+				for it.Seek(i*scenario.seekStep.Milliseconds()) != chunkenc.ValNone {
+					i++
+				}
+			}
+		})
+	}
+}
+
 func TestSeekCorrectlyDealWithSinglePointChunks(t *testing.T) {
 	t.Parallel()
-	chunkOne := mkChunk(t, model.Time(1*step/time.Millisecond), 1, promchunk.PrometheusXorChunk)
-	chunkTwo := mkChunk(t, model.Time(10*step/time.Millisecond), 1, promchunk.PrometheusXorChunk)
+	chunkOne := mkChunk(t, step, model.Time(1*step/time.Millisecond), 1, promchunk.PrometheusXorChunk)
+	chunkTwo := mkChunk(t, step, model.Time(10*step/time.Millisecond), 1, promchunk.PrometheusXorChunk)
 	chunks := []chunk.Chunk{chunkOne, chunkTwo}
 
 	sut := NewChunkMergeIterator(chunks, 0, 0)
@@ -72,13 +121,13 @@ func TestSeekCorrectlyDealWithSinglePointChunks(t *testing.T) {
 	require.Equal(t, int64(1*time.Second/time.Millisecond), actual)
 }
 
-func createChunks(b *testing.B, numChunks, numSamplesPerChunk, duplicationFactor int, enc promchunk.Encoding) []chunk.Chunk {
+func createChunks(b *testing.B, step time.Duration, numChunks, numSamplesPerChunk, duplicationFactor int, enc promchunk.Encoding) []chunk.Chunk {
 	result := make([]chunk.Chunk, 0, numChunks)
 
 	for d := 0; d < duplicationFactor; d++ {
 		for c := 0; c < numChunks; c++ {
 			minTime := step * time.Duration(c*numSamplesPerChunk)
-			result = append(result, mkChunk(b, model.Time(minTime.Milliseconds()), numSamplesPerChunk, enc))
+			result = append(result, mkChunk(b, step, model.Time(minTime.Milliseconds()), numSamplesPerChunk, enc))
 		}
 	}
 

diff --git a/pkg/querier/batch/chunk.go b/pkg/querier/batch/chunk.go
@@ -21,6 +21,10 @@ func (i *chunkIterator) reset(chunk GenericChunk) {
 	i.batch.Index = 0
 }
 
+func (i *chunkIterator) MaxCurrentChunkTime() int64 {
+	return i.chunk.MaxTime
+}
+
 // Seek advances the iterator forward to the value at or after
 // the given timestamp.
 func (i *chunkIterator) Seek(t int64, size int) bool {

diff --git a/pkg/querier/batch/chunk_test.go b/pkg/querier/batch/chunk_test.go
@@ -44,7 +44,7 @@ func forEncodings(t *testing.T, f func(t *testing.T, enc promchunk.Encoding)) {
 	}
 }
 
-func mkChunk(t require.TestingT, from model.Time, points int, enc promchunk.Encoding) chunk.Chunk {
+func mkChunk(t require.TestingT, step time.Duration, from model.Time, points int, enc promchunk.Encoding) chunk.Chunk {
 	metric := labels.Labels{
 		{Name: model.MetricNameLabel, Value: "foo"},
 	}
@@ -65,7 +65,7 @@ func mkChunk(t require.TestingT, from model.Time, points int, enc promchunk.Enco
 }
 
 func mkGenericChunk(t require.TestingT, from model.Time, points int, enc promchunk.Encoding) GenericChunk {
-	ck := mkChunk(t, from, points, enc)
+	ck := mkChunk(t, step, from, points, enc)
 	return NewGenericChunk(int64(ck.From), int64(ck.Through), ck.Data.NewIterator)
 }
 

diff --git a/pkg/querier/batch/merge.go b/pkg/querier/batch/merge.go
@@ -128,6 +128,14 @@ func (c *mergeIterator) AtTime() int64 {
 	return c.batches[0].Timestamps[0]
 }
 
+func (c *mergeIterator) MaxCurrentChunkTime() int64 {
+	if len(c.h) < 1 {
+		return -1
+	}
+
+	return c.h[0].MaxCurrentChunkTime()
+}
+
 func (c *mergeIterator) Batch() promchunk.Batch {
 	return c.batches[0]
 }

diff --git a/pkg/querier/batch/non_overlapping.go b/pkg/querier/batch/non_overlapping.go
@@ -32,6 +32,10 @@ func (it *nonOverlappingIterator) Seek(t int64, size int) bool {
 	}
 }
 
+func (it *nonOverlappingIterator) MaxCurrentChunkTime() int64 {
+	return it.iter.MaxCurrentChunkTime()
+}
+
 func (it *nonOverlappingIterator) Next(size int) bool {
 	for {
 		if it.iter.Next(size) {

diff --git a/pkg/storage/bucket/s3/bucket_client.go b/pkg/storage/bucket/s3/bucket_client.go
@@ -124,7 +124,7 @@ func (b *BucketWithRetries) retry(ctx context.Context, f func() error, operation
 		level.Error(b.logger).Log("msg", "bucket operation fail after retries", "err", lastErr, "operation", operationInfo)
 		return lastErr
 	}
-	return nil
+	return retries.Err()
 }
 
 func (b *BucketWithRetries) Name() string {

diff --git a/pkg/storage/bucket/s3/bucket_client_test.go b/pkg/storage/bucket/s3/bucket_client_test.go
@@ -73,6 +73,25 @@ func TestBucketWithRetries_UploadFailed(t *testing.T) {
 	require.ErrorContains(t, err, "failed upload: ")
 }
 
+func TestBucketWithRetries_ContextCanceled(t *testing.T) {
+	t.Parallel()
+
+	m := mockBucket{}
+	b := BucketWithRetries{
+		logger:           log.NewNopLogger(),
+		bucket:           &m,
+		operationRetries: 5,
+		retryMinBackoff:  10 * time.Millisecond,
+		retryMaxBackoff:  time.Second,
+	}
+
+	ctx, cancel := context.WithCancel(context.Background())
+	cancel()
+	obj, err := b.GetRange(ctx, "dummy", 0, 10)
+	require.ErrorIs(t, err, context.Canceled)
+	require.Nil(t, obj)
+}
+
 type fakeReader struct {
 }
 
@@ -121,7 +140,7 @@ func (m *mockBucket) Get(ctx context.Context, name string) (io.ReadCloser, error
 
 // GetRange mocks objstore.Bucket.GetRange()
 func (m *mockBucket) GetRange(ctx context.Context, name string, off, length int64) (io.ReadCloser, error) {
-	return nil, nil
+	return io.NopCloser(bytes.NewBuffer(bytes.Repeat([]byte{1}, int(length)))), nil
 }
 
 // Exists mocks objstore.Bucket.Exists()

diff --git a/pkg/storegateway/bucket_store_metrics.go b/pkg/storegateway/bucket_store_metrics.go
@@ -214,16 +214,16 @@ func (m *BucketStoreMetrics) Collect(out chan<- prometheus.Metric) {
 
 	data.SendSumOfGaugesPerUser(out, m.blocksLoaded, "thanos_bucket_store_blocks_loaded")
 
-	data.SendSumOfSummariesWithLabels(out, m.seriesDataTouched, "thanos_bucket_store_series_data_touched", "data_type")
-	data.SendSumOfSummariesWithLabels(out, m.seriesDataFetched, "thanos_bucket_store_series_data_fetched", "data_type")
-	data.SendSumOfSummariesWithLabels(out, m.seriesDataSizeTouched, "thanos_bucket_store_series_data_size_touched_bytes", "data_type")
-	data.SendSumOfSummariesWithLabels(out, m.seriesDataSizeFetched, "thanos_bucket_store_series_data_size_fetched_bytes", "data_type")
-	data.SendSumOfSummariesWithLabels(out, m.seriesBlocksQueried, "thanos_bucket_store_series_blocks_queried")
+	data.SendSumOfHistogramsWithLabels(out, m.seriesDataTouched, "thanos_bucket_store_series_data_touched", "data_type")
+	data.SendSumOfHistogramsWithLabels(out, m.seriesDataFetched, "thanos_bucket_store_series_data_fetched", "data_type")
+	data.SendSumOfHistogramsWithLabels(out, m.seriesDataSizeTouched, "thanos_bucket_store_series_data_size_touched_bytes", "data_type")
+	data.SendSumOfHistogramsWithLabels(out, m.seriesDataSizeFetched, "thanos_bucket_store_series_data_size_fetched_bytes", "data_type")
+	data.SendSumOfHistogramsWithLabels(out, m.seriesBlocksQueried, "thanos_bucket_store_series_blocks_queried")
 
 	data.SendSumOfHistograms(out, m.seriesGetAllDuration, "thanos_bucket_store_series_get_all_duration_seconds")
 	data.SendSumOfHistograms(out, m.seriesMergeDuration, "thanos_bucket_store_series_merge_duration_seconds")
 	data.SendSumOfCounters(out, m.seriesRefetches, "thanos_bucket_store_series_refetches_total")
-	data.SendSumOfSummaries(out, m.resultSeriesCount, "thanos_bucket_store_series_result_series")
+	data.SendSumOfHistograms(out, m.resultSeriesCount, "thanos_bucket_store_series_result_series")
 	data.SendSumOfCounters(out, m.queriesDropped, "thanos_bucket_store_queries_dropped_total")
 
 	data.SendSumOfCountersWithLabels(out, m.cachedPostingsCompressions, "thanos_bucket_store_cached_postings_compressions_total", "op")