DESCRIPTION

Package: scPlant
Title: A Versatile Framework for Single-cell Transcriptomic Data Analysis in Plants
Version: 1.0.0
Authors@R: 
    person(given = "Shanni",
           family = "Cao",
           role = c("aut", "cre"),
           email = "xiaobaicainiao@163.com")
Maintainer: Shanni Cao <xiaobaicainiao@163.com>
Description: The scPlant pipeline is implemented with plentiful functions for diverse analytical tasks, 
    ranging from basic data processing to advanced demands such as cell type annotation and
    deconvolution, trajectory inference, cross-species data integration and 
    cell-type specific gene regulatory network construction.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.2
Imports:
    Seurat,
    clusterProfiler,
    dplyr,
    foreach,
    ggplot2,
    igraph,
    ComplexHeatmap,
    SingleCellExperiment,
    magrittr,
    stats,
    utils,
    graphics,
    grDevices
Suggests:
    shiny,
    monocle,
    slingshot,
    scrattch.hicat,
    CellFunTopic,
    knitr,
    rmarkdown
Depends: 
    R (>= 2.10)
VignetteBuilder: knitr
URL: https://github.com/compbioNJU/scPlant
BugReports: https://github.com/compbioNJU/scPlant/issues