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genHomogeneousPoisson.m
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genHomogeneousPoisson.m
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function spikeTrains = genHomogeneousPoisson(N, M, param)
% Generate homogeneous Poisson process for testing
% spikeTrains = genHomogeneousPoisson(N, M, param)
%
% Input
% N: trials per spikeTrains
% M: number of sets of trials
% param.lambda: mean number of total action potentials
% (irrespective of duration)
% param.tOffset: offset at the beginning
% param.duration: duration of spiking
%
% $Id$
% Copyright 2009 Memming. All rights reserved.
% Redistribution and use in source and binary forms, with or without
% modification, are permitted provided that the following conditions are met:
% - Redistributions of source code must retain the above copyright notice,
% this list of conditions and the following disclaimer.
% - Redistributions in binary form must reproduce the above copyright notice,
% this list of conditions and the following disclaimer in the documentation
% and/or other materials provided with the distribution.
% - Neither the name of the iocane project nor the names of its contributors
% may be used to endorse or promote products derived from this software
% without specific prior written permission.
%
% THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
% AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
% IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
% ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
% LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
% CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
% SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
% INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
% CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
% ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
% POSSIBILITY OF SUCH DAMAGE.
lambda = param.lambda;
tOffset = param.tOffset;
duration = param.duration;
spikeTrainsTemplate.N = N;
spikeTrainsTemplate.duration = 2 * tOffset + duration;
spikeTrainsTemplate.source = '$Id$';
spikeTrainsTemplate.data = cell(N, 1);
spikeTrainsTemplate.samplingRate = Inf;
for kM = 1:M
spikeTrains(kM) = spikeTrainsTemplate;
for k = 1:N
spikeTrains(kM).data{k} = ...
tOffset + sort(rand(poissrnd(lambda), 1)) * duration;
end
end
% vim:ts=8:sts=4:sw=4