Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Problem deciding version of bedtools #14

Open
cbird808 opened this issue Nov 9, 2020 · 0 comments
Open

Problem deciding version of bedtools #14

cbird808 opened this issue Nov 9, 2020 · 0 comments

Comments

@cbird808
Copy link
Contributor

cbird808 commented Nov 9, 2020

on 2.29.2, the BEDTOOLSFLAG variable was getting set to "OLD" when it should have been set to new.

I changed lines 272 and 273, swapping the arguments passed to CheckVersion function

		CheckVersion "2.24.0" "$real_version" && BEDTOOLSFLAG="OLD"
		CheckVersion "$real_version" "2.26.0" && BEDTOOLSFLAG="NEW"

I tested it, and it works unless the version is 2.24.0 - 2.26.0
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@cbird808