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NetPyNe Model of CA3 Layer Repo

  1. Type or ./compile or the equivalent nrnivmodl mod. This should create a directory called either i686 or x86_64, depending on your computer's architecture.

Overview of file structure:

  • /init.py: Main executable; calls functions from other modules. Sets what parameter file to use.

  • /netParams.py: Network parameters

  • /cfg.py: Simulation configuration

  • /PYRcell.json: Cell parameters

  • /OLMcell.json: Cell parameters

  • /BAScell.json: Cell parameters

init.py will plot:

 - Cell 1 of the pyramidal cell population

 - Raster plot 

 - LFP plots at 5 different locations across the apical dendrite and an average

Nov 30 2020