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Improve variant QC evaluation by exploring use of NIST tracks (for finer-grained stratification of different variant types) #102

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gtiao opened this issue Sep 15, 2020 · 1 comment
Open

Improve variant QC evaluation by exploring use of NIST tracks (for finer-grained stratification of different variant types) #102

gtiao opened this issue Sep 15, 2020 · 1 comment

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@gtiao
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gtiao commented Sep 15, 2020

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@ch-kr
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ch-kr commented Mar 9, 2023

NIST creates genomic standards, and created set of tracks that show where there are higher vs lower confidence indels (and other variant types). Could use these tracks to show how we perform in "easy" regions vs "challenging" regions

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@gtiao @ch-kr