Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

audit.R Custom Null Threshold Quantile in Audit #24

Open
gwaybio opened this issue May 10, 2019 · 0 comments · May be fixed by #25
Open

audit.R Custom Null Threshold Quantile in Audit #24

gwaybio opened this issue May 10, 2019 · 0 comments · May be fixed by #25

Comments

@gwaybio
Copy link
Member

gwaybio commented May 10, 2019

The null threshold quantile should be considered a hyperparameter.

It should be a quick fix to add a command line argument with 0.95 as default.
gwaybio added a commit to gwaybio/cytominer_scripts that referenced this issue May 10, 2019
@gwaybio
closes broadinstitute#24
b9241c1
@gwaybio gwaybio linked a pull request May 10, 2019 that will close this issue
Open
@shntnu shntnu changed the title Custom Null Threshold Quantile in Audit audit.R Custom Null Threshold Quantile in Audit Mar 25, 2020
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging a pull request may close this issue.

Adding custom --null_quantile flag in audit gwaybio/cytominer_scripts
1 participant
@gwaybio