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Log the command line on debug mode
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loic-couderc committed Jun 29, 2017
1 parent 1a5008c commit 0881a10
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1 change: 1 addition & 0 deletions scripts/assembler_factory.py
Original file line number Diff line number Diff line change
Expand Up @@ -70,6 +70,7 @@ def run(self):
shutil.rmtree(self.workdir)
os.mkdir(self.workdir)

logger.debug("CMD: %s" % self.cmd_line)
subprocess.check_call(self.cmd_line, shell=True, bufsize=0)

return self.fasta_file
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