From bbd443ffe246d593e7629aeb7279fbb27c33a02d Mon Sep 17 00:00:00 2001 From: Edmund Miller Date: Thu, 4 Jul 2024 19:26:30 -0500 Subject: [PATCH] test: Add -nc to wget --- justfile | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/justfile b/justfile index 2bb268d..4588055 100644 --- a/justfile +++ b/justfile @@ -1,6 +1,6 @@ dragen := "./result/bin/dragen-os" -test_segfault: # test_data build_reference +test_segfault: test_data build_reference {{dragen}} -r dragmap --RGSM test --num-threads 2 -1 SRX882903_T2.fastq.gz > output.log build_reference: test_data @@ -12,8 +12,8 @@ build_reference: test_data --ht-num-threads 2 test_data: - wget https://raw.githubusercontent.com/nf-core/test-datasets/nascent/testdata/SRX882903_T2.fastq.gz - wget https://raw.githubusercontent.com/nf-core/test-datasets/nascent/reference/GRCh38_chr21.fa + wget -nc https://raw.githubusercontent.com/nf-core/test-datasets/nascent/testdata/SRX882903_T2.fastq.gz + wget -nc https://raw.githubusercontent.com/nf-core/test-datasets/nascent/reference/GRCh38_chr21.fa issue_10: {{dragen}} \