diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml index bbb0b0ed..a7516418 100644 --- a/.github/workflows/test.yml +++ b/.github/workflows/test.yml @@ -34,8 +34,8 @@ jobs: env: TEST_REDIS_HOST: localhost TEST_REDIS_PORT: 6379 - - name: Codecov - run: codecov + - name: Upload coverage to Codecov + uses: codecov/codecov-action@v3 install: runs-on: ubuntu-latest strategy: diff --git a/bento_lib/package.cfg b/bento_lib/package.cfg index 764440e6..9281863f 100644 --- a/bento_lib/package.cfg +++ b/bento_lib/package.cfg @@ -1,5 +1,5 @@ [package] name = bento_lib -version = 6.0.1 +version = 6.0.2 authors = David Lougheed, Paul Pillot author_emails = david.lougheed@mail.mcgill.ca, paul.pillot@computationalgenomics.ca diff --git a/requirements.txt b/requirements.txt index 38ca1488..32e5ca2c 100644 --- a/requirements.txt +++ b/requirements.txt @@ -14,18 +14,17 @@ cffi==1.15.1 chardet==5.1.0 charset-normalizer==3.1.0 click==8.1.3 -codecov==2.1.12 colorama==0.4.6 -coverage==7.2.2 -cryptography==39.0.2 +coverage==7.2.5 +cryptography==40.0.2 distlib==0.3.6 Django==4.1.7 djangorestframework==3.14.0 entrypoints==0.4 exceptiongroup==1.1.1 -filelock==3.10.0 +filelock==3.12.0 flake8==6.0.0 -Flask==2.2.3 +Flask==2.2.5 frozenlist==1.3.3 h11==0.14.0 h2==4.1.0 @@ -33,7 +32,7 @@ hpack==4.0.0 hypercorn==0.14.3 hyperframe==6.0.1 idna==3.4 -importlib-metadata==6.0.0 +importlib-metadata==6.6.0 iniconfig==2.0.0 itsdangerous==2.1.2 Jinja2==3.1.2 @@ -42,10 +41,10 @@ MarkupSafe==2.1.2 mccabe==0.7.0 more-itertools==9.1.0 multidict==6.0.4 -mypy==1.1.1 +mypy==1.2.0 mypy-extensions==1.0.0 -packaging==23.0 -platformdirs==3.1.1 +packaging==23.1 +platformdirs==3.5.0 pluggy==1.0.0 priority==2.0.0 psycopg2==2.9.5 @@ -53,41 +52,42 @@ py==1.11.0 pycodestyle==2.10.0 pycparser==2.21 pyflakes==3.0.1 +PyJWT==2.6.0 pyparsing==3.0.9 pyproject_api==1.5.1 pyrsistent==0.19.3 -pytest==7.2.2 -pytest-asyncio==0.20.3 +pytest==7.3.1 +pytest-asyncio==0.21.0 pytest-cov==4.0.0 pytest-django==4.5.2 python-dateutil==2.8.2 -pytz==2022.7.1 +pytz==2023.3 PyYAML==6.0 -quart==0.18.3 +quart==0.18.4 redis==4.5.4 -requests==2.28.2 +requests==2.30.0 responses==0.23.1 six==1.16.0 -sqlparse==0.4.3 +sqlparse==0.4.4 toml==0.10.2 tomli==2.0.1 -tox==4.4.7 -types-aiofiles==23.1.0.0 -types-colorama==0.4.15.8 +tox==4.5.1 +types-aiofiles==23.1.0.2 +types-colorama==0.4.15.11 types-cryptography==3.3.23.2 -types-jsonschema==4.17.0.6 -types-psycopg2==2.9.21.8 -types-pyOpenSSL==23.0.0.4 -types-PyYAML==6.0.12.8 -types-redis==4.5.1.5 -types-requests==2.28.11.15 -types-toml==0.10.8.5 -types-urllib3==1.26.25.8 +types-jsonschema==4.17.0.7 +types-psycopg2==2.9.21.9 +types-pyOpenSSL==23.1.0.2 +types-PyYAML==6.0.12.9 +types-redis==4.5.4.1 +types-requests==2.29.0.0 +types-toml==0.10.8.6 +types-urllib3==1.26.25.12 typing_extensions==4.5.0 -urllib3==1.26.15 -virtualenv==20.21.0 +urllib3==2.0.1 +virtualenv==20.23.0 wcwidth==0.2.6 -Werkzeug==2.2.3 +Werkzeug==2.3.3 wsproto==1.2.0 -yarl==1.8.2 +yarl==1.9.2 zipp==3.15.0 diff --git a/setup.py b/setup.py index b61acfd9..92628a16 100644 --- a/setup.py +++ b/setup.py @@ -24,9 +24,9 @@ "Werkzeug>=2.2.3,<3", ], extras_require={ - "flask": ["Flask>=2.2.3,<3"], + "flask": ["Flask>=2.2.5,<3"], "django": ["Django>=4.1.7,<5", "djangorestframework>=3.14.0,<3.15"], - "quart": ["quart>=0.18.3,<0.19"], + "quart": ["quart>=0.18.4,<0.19"], }, author=config["package"]["authors"],