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1. uDance uDance Public

   Java 43 6

2. apples apples Public

   distance based phylogenetic placement

   Python 25 5

3. misa misa Public

   mixed sample analysis

   Python 3

4. raphael-group/hatchet raphael-group/hatchet Public

   HATCHet (Holistic Allele-specific Tumor Copy-number Heterogeneity) is an algorithm that infers allele and clone-specific CNAs and WGDs jointly across multiple tumor samples from the same patient, a…

   Roff 69 32

5. niemasd/TreeCluster niemasd/TreeCluster Public

   Efficient phylogenetic clustering of viral sequences

   Python 78 10

6. snakemake-tutorial2 snakemake-tutorial2 Public

   Short snakemake tutorial

   Python 2