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test: install awb in lab stack #370

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test: install awb in lab stack #370

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a698724
test: install awb in lab stack
danielhollas Apr 13, 2023
18aab89
Pre-install AWB requirements via mamba
danielhollas Apr 13, 2023
62264ce
fix
danielhollas Apr 14, 2023
950adee
Merge branch 'main' into preinstall-awb
danielhollas Apr 20, 2023
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22 changes: 20 additions & 2 deletions stack/lab/Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -43,6 +43,25 @@ RUN git clone https://github.com/aiidalab/aiidalab-home && \
fix-permissions "${CONDA_DIR}" && \
fix-permissions "/home/${NB_USER}"

# Install aiidalab-base-widgets
RUN mamba install --yes \
PyCifRW~=4.4 \
ansi2html~=1.6 \
ase~=3.18 \
bokeh~=2.0 \
humanfriendly~=10.0 \
ipytree~=0.2 \
ipywidgets~=7.7 \
"widgetsnbextension<3.6.3" \
more-itertools~=8.0 \
pymysql~=0.9 \
nglview~=3.0 \
spglib~=1.14 \
&& mamba clean --all -f -y && \
fix-permissions "${CONDA_DIR}" && \
fix-permissions "/home/${NB_USER}"
RUN pip install --no-cache-dir aiidalab-widgets-base==2.0.0b6

# Install and enable appmode.
RUN git clone https://github.com/oschuett/appmode.git && \
cd appmode && \
Expand Down Expand Up @@ -70,7 +89,6 @@ ENV AIIDALAB_DEFAULT_GIT_BRANCH master
#
# Please note that multiple entries must be whitespace delimited.
# Please see `aiidalab install --help` for more information.
# ENV AIIDALAB_DEFAULT_APPS "aiidalab-widgets-base~=1.0"
ENV AIIDALAB_DEFAULT_APPS ""

# Specify default factory reset (not set):
Expand All @@ -80,7 +98,7 @@ USER ${NB_USER}

WORKDIR "/home/${NB_USER}"

RUN mkdir -p /home/${NB_USER}/apps
RUN mkdir -p /home/${NB_USER}/apps

ENV NOTEBOOK_ARGS \
"--NotebookApp.default_url='/apps/apps/home/start.ipynb'" \
Expand Down