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DESCRIPTION
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DESCRIPTION
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Package: rsfcNet
Title: Analyze resting state functional connectivity networks
Version: 1.01
Authors@R: person("Brandon Vaughan", email = "[email protected]", role = c("aut", "cre"))
Description: This package is a companion to the igraph package which facilitates the analysis of resting state functional MRI data. The package contains several entirely custom-written functions to facilitate the preparation of connectome data for analysis as well as functions for graph theory metrics not available (as of 2018) in igraph. Other functions make applying igraph functions to multiple graphs fast and easy. Some statistical analysis functions are also included for large P and P >> n settings. Certain functions also have built in parallel processing support.
Depends: R (>= 3.4.0),
igraph (>= 1.1.0),
knitr (>= 1.2.0),
kableExtra (>= 1.0.1),
pbapply (>= 1.3-4),
parallel (>= 3.4.1)
Imports:
visNetwork (>= 2.0.4),
fdrtool (>= 1.2.15),
ggpubr (>= 0.1.6),
psych (>= 1.9.12),
imputeTS (>= 2.7),
forecast (>= 8.4),
st (>= 1.2.5),
rgexf (>= 0.15.3),
plotly (>= 4.8.0),
corpcor (>= 1.6.8),
parcor (>= 0.2-6),
viridis (>= 0.5.1),
fields (>= 9.6),
colorRamps (>= 2.3),
grDevices (>= 3.4.2),
CorShrink (>= 0.1-6),
expm (>= 0.99),
MASS (>= 7.3)
Suggests:
brainGraph (>= 2.2.0),
GGally (>= 1.3.2)
License: GNU General Public License
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2